Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03380 ATGGCTTTAAACACTACCAAGCTTTTTGCCACAATTCTTGTTGTGTCACTCCTTTCAACACCTTTATTAACCAATGCATGTGGATCATGCAAGGCACCAACTCCGCCGCCGCCACCAAAAGCGAAATGCCCCAAAGACACATTGAAATTAGGGGTTTGTGCTGATGTCTTAGGTCTTGTTAACGTTATTGTTGGTTCCCCTGCTTCAAGCAAGTGTTGTGCATTGCTTGAAGGCTTGGTTGATTTGGAAGCAGCACTTTGTTTGTGCACCGCTATTAAAGCCAATGTTCTTGGCATCAACTTAGATATCCCTCTCACTCTCAGCTTGCTCCTCAGTGCTTGTCAAAAATCACTTCCTCCTGGCTTCCAGTGTTGA 375 0.448 MALNTTKLFATILVVSLLSTPLLTNACGSCKAPTPPPPPKAKCPKDTLKLGVCADVLGLVNVIVGSPASSKCCALLEGLVDLEAALCLCTAIKANVLGINLDIPLTLSLLLSACQKSLPPGFQC 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03380 124 PANTHER LIPID TRANSFER PROTEIN 26 124 - -
Aip06g03380 124 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 46 124 IPR036312 -
Aip06g03380 124 SMART aai_6 43 124 IPR016140 -
Aip06g03380 124 Pfam Hydrophobic seed protein 43 124 IPR027923 -
Aip06g03380 124 CDD HPS_like 46 124 IPR027923 -
Aip06g03380 124 PANTHER - 26 124 - -
Aip06g03380 124 Gene3D - 41 124 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03380 Aip-Chr6 130592804 130593910 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03380 16 124 Acyl Lipid Metabolism Gene Families AT4G22490 37.615 2.87e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03380 - - gmx:547594 162.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03380 06 130592804 130593910 Aip06g03380 06 130592804 130593910 ECH
Aip06g03380 06 130592804 130593910 Aip08g03104 08 121069222 121070755 PCT