Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03057 ATGGGTAGGAAGGGACACCAACTATTCGACGAAAAGAATGACGGGTTTTTTTTCTCTGTTTCCAATTTGGGTTCTCAATGGAGCGTCCAAGAACAAGAAGGTTCCTATTACCACCCAGGAGGCTTGTTTGCAAGCGTTGGCCAAATGGGTACCATGGGTTTTGGTGTTCAACAACCAAATCCTTCTTCTTCAGCTGATTCTGATTCACGTGACAATGACAACGGTGGTTTGAAACTACCCTTCAATGATTTGTACGTTAAGTATGTTCAGTGTCTTGGGAAAGTTCAATTCTTTGAGGAAGGGGAAGAAGGGGTTAAGGCTAAGAAGAAAAGGAGTGGCCTTAAATTGAAGGTTAGAATCAGGAACCCTTCTCTGAGGAGGCTTTTCAGTGGGGCAATTGCAGGCGCTATTTCGCGAACCGCAGTGGCACCATTGGAGACTATAAGGACTCACTTGATGGTTGGAAGCAGTGGCCATTCCACCACTGAGGTGTTCCATAATATCATGAAGACTGATGGATGGACAGGGTTGTTTAGGGGTAATTTTGTTAATGTCATTCGAGTTGCACCTAGCAAGGCTATTGAGCTATTTGCTTATGATACAGTTAACAAGAACCTATCACCAAAGCCTGGGGAACAGCCTAAAGTTCCTATTCCTGCGTCATTGATTGCAGGTGCCTGTGCCGGAGTGAGTTCAACTATATGCACATATCCTCTCGAGTTGGTCAAAACTCGACTAACTATCCAGAGAGGTGTTTACAACGGTCTACTCGATGCATTCTTGAAAATAATTCGAGAGGAGGGTCCGGCGGAACTTTATAGAGGCCTTGCCCCCAGTCTTATTGGAGTCATTCCGTATGCTGCCACCAATTACTTTGCCTATGACACCTTACGGAAAGCATACCGGAAGATTTTTAAGCAAGAAAAGATTGGTAACATTGAAACCCTTTTGATTGGATCGGCAGCCGGTGCTATCTCAAGCAGTGCAACGTTTCCACTTGAGGTGGCTCGCAAGCATATGCAAGTGGGAGCTCTGAGTGGAAGACAAGTTTACAAAAATGTGATTCATGCCCTTGCAAGCATACTAGAACACGAAGGGATTCCCGGTTTATACAGAGGGCTCGGGCCTAGTTGCATGAAATTAGTGCCGGCTGCTGGAATCTCTTTCATGTGCTATGAAGCATGCAAGAGGATATTGGTAGACGACGATGAAGAGGCGTAA 1221 0.4537 MGRKGHQLFDEKNDGFFFSVSNLGSQWSVQEQEGSYYHPGGLFASVGQMGTMGFGVQQPNPSSSADSDSRDNDNGGLKLPFNDLYVKYVQCLGKVQFFEEGEEGVKAKKKRSGLKLKVRIRNPSLRRLFSGAIAGAISRTAVAPLETIRTHLMVGSSGHSTTEVFHNIMKTDGWTGLFRGNFVNVIRVAPSKAIELFAYDTVNKNLSPKPGEQPKVPIPASLIAGACAGVSSTICTYPLELVKTRLTIQRGVYNGLLDAFLKIIREEGPAELYRGLAPSLIGVIPYAATNYFAYDTLRKAYRKIFKQEKIGNIETLLIGSAAGAISSSATFPLEVARKHMQVGALSGRQVYKNVIHALASILEHEGIPGLYRGLGPSCMKLVPAAGISFMCYEACKRILVDDDEEA 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03057 406 MobiDBLite consensus disorder prediction 54 70 - -
Aip08g03057 406 PRINTS Mitochondrial carrier protein signature 127 140 IPR002067 GO:0055085
Aip08g03057 406 PRINTS Mitochondrial carrier protein signature 140 154 IPR002067 GO:0055085
Aip08g03057 406 PRINTS Mitochondrial carrier protein signature 180 200 IPR002067 GO:0055085
Aip08g03057 406 PRINTS Mitochondrial carrier protein signature 231 249 IPR002067 GO:0055085
Aip08g03057 406 PRINTS Mitochondrial carrier protein signature 273 291 IPR002067 GO:0055085
Aip08g03057 406 PRINTS Mitochondrial carrier protein signature 319 341 IPR002067 GO:0055085
Aip08g03057 406 ProSiteProfiles Solute carrier (Solcar) repeat profile. 216 300 IPR018108 -
Aip08g03057 406 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 30 404 - -
Aip08g03057 406 ProSiteProfiles Solute carrier (Solcar) repeat profile. 310 398 IPR018108 -
Aip08g03057 406 PANTHER SOLUTE CARRIER FAMILY 25 30 404 - -
Aip08g03057 406 MobiDBLite consensus disorder prediction 54 73 - -
Aip08g03057 406 Pfam Mitochondrial carrier protein 216 303 IPR018108 -
Aip08g03057 406 Pfam Mitochondrial carrier protein 310 401 IPR018108 -
Aip08g03057 406 Pfam Mitochondrial carrier protein 124 206 IPR018108 -
Aip08g03057 406 Gene3D Mitochondrial carrier domain 120 404 IPR023395 -
Aip08g03057 406 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 205 IPR018108 -
Aip08g03057 406 SUPERFAMILY Mitochondrial carrier 123 394 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03057 Aip-Chr8 120259521 120263062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03057 1 406 Organic Solute Cotransporters AT4G32400 67.647 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03057 K14684 - zju:107406946 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03057 08 120259521 120263062 Aip08g03057 08 120259521 120263062 ECH
Aip06g03334 06 130012204 130015052 Aip08g03057 08 120259521 120263062 PCT