Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03334 ATGGGTGGAAGAACAGGAATTCAGCGATTTCACCACGATGATGATAACCGAAAACAAAACGATTGGTTTTTTCTCTCTGTTTCCGGTTTAGGTTCTTCTCATTCTGAATGGGCTCTCAACCCAGGTGGATTGTTCGCAAGCGTAGGTCAAATGGGAATGGGGTTTGGTGCACCAAACCCTACACCTTCTCCCTCTTCTGATTCCCAAGGAAGCAACAATGGAGTCAGAATCCCCTGCACTGAGTTGTACGTGAAGTACGTGCATTCAGAAGGGAAAGTGAAGATTGTTTCTGAATCGGAGGAGTTAGTTATGGAGGAAGAGGAAGGTGTTAAGGGGAAGAAGAAAAAGGCTGGGTTTTTTGGGGTTAAGATGAAGGTTAAGGTGAAGAACCCTTCACTGAGGAGGTTGATTAGTGGTGCATTCGCGGGTGCAATTTCGCGAACTTGCGTGGCGCCATTGGAGACAATAAGAACTCATTTGATGGTTGGGAGTAGTGGCCATTCAACAGGTGAGGTGTTTCAGAATATCATGAAGACTGATGGCTGGAAGGGATTGTTCAGGGGTAATTTTGTCAATGTCATCAGGGTTGCTCCTAGCAAGGCTATTGAGCTATTTGCTTATGACACAGTTAACAAGAATCTGTCACCAAAGCCTGGGGAGCAGGCCATGCTTCCTATTCCTGCGTCATTGATTGCAGGTGCCTGTGCCGGAGTTAGTTCAACTATATGCACATATCCTCTAGAGTTGGTCAAAACTCGACTGACCATCCAGAGAGGTGTTTATAATGGTTTAGTTGATGCATTCTTGAAAATAATTCAACAAGAAGGTCCTGGTGAACTTTATCGAGGACTCGCCCCAAGTCTTATTGGTGTAATTCCATATTCTGCCACCAACTACTTTGCATACGACACATTAAGAAAAGCATACAAGAAAATCTTCAAACAAGACAAGATTGGAAACATTGAAACGCTCTTGATAGGATCCGCTGCTGGTGCCATATCGAGTAGCGCAACTTTTCCACTCGAAGTGGCTCGCAAGCATATGCAAGTGGGGGCACTCAGTGGAAGGCAAGTTTACAAGAATGTTGTTCATGCCCTTGCAAGCATACTTGAACAAGAAGGTATTCAAGGATTGTATCGAGGGTTGGGACCTAGCTGCATGAAGTTGGTGCCAGCTGCAGGTATCTCTTTCATGTGCTATGAAGCTTGCAAGAGGATACTAGTAGAGGATGATGATGAAGAATAG 1245 0.4482 MGGRTGIQRFHHDDDNRKQNDWFFLSVSGLGSSHSEWALNPGGLFASVGQMGMGFGAPNPTPSPSSDSQGSNNGVRIPCTELYVKYVHSEGKVKIVSESEELVMEEEEGVKGKKKKAGFFGVKMKVKVKNPSLRRLISGAFAGAISRTCVAPLETIRTHLMVGSSGHSTGEVFQNIMKTDGWKGLFRGNFVNVIRVAPSKAIELFAYDTVNKNLSPKPGEQAMLPIPASLIAGACAGVSSTICTYPLELVKTRLTIQRGVYNGLVDAFLKIIQQEGPGELYRGLAPSLIGVIPYSATNYFAYDTLRKAYKKIFKQDKIGNIETLLIGSAAGAISSSATFPLEVARKHMQVGALSGRQVYKNVVHALASILEQEGIQGLYRGLGPSCMKLVPAAGISFMCYEACKRILVEDDDEE 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03334 414 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 308 IPR018108 -
Aip06g03334 414 ProSiteProfiles Solute carrier (Solcar) repeat profile. 130 213 IPR018108 -
Aip06g03334 414 PANTHER SOLUTE CARRIER FAMILY 25 33 412 - -
Aip06g03334 414 ProSiteProfiles Solute carrier (Solcar) repeat profile. 318 406 IPR018108 -
Aip06g03334 414 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 33 412 - -
Aip06g03334 414 Gene3D Mitochondrial carrier domain 126 412 IPR023395 -
Aip06g03334 414 PRINTS Mitochondrial carrier protein signature 135 148 IPR002067 GO:0055085
Aip06g03334 414 PRINTS Mitochondrial carrier protein signature 148 162 IPR002067 GO:0055085
Aip06g03334 414 PRINTS Mitochondrial carrier protein signature 188 208 IPR002067 GO:0055085
Aip06g03334 414 PRINTS Mitochondrial carrier protein signature 239 257 IPR002067 GO:0055085
Aip06g03334 414 PRINTS Mitochondrial carrier protein signature 281 299 IPR002067 GO:0055085
Aip06g03334 414 PRINTS Mitochondrial carrier protein signature 327 349 IPR002067 GO:0055085
Aip06g03334 414 SUPERFAMILY Mitochondrial carrier 131 402 IPR023395 -
Aip06g03334 414 Pfam Mitochondrial carrier protein 131 214 IPR018108 -
Aip06g03334 414 Pfam Mitochondrial carrier protein 318 409 IPR018108 -
Aip06g03334 414 Pfam Mitochondrial carrier protein 225 311 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03334 Aip-Chr6 130012204 130015052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g03334 317 414 Organic Solute Cotransporters AT4G32400 32.000 7.60e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03334 K14684 - qsu:111999876 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03334 06 130012204 130015052 Aip06g03334 06 130012204 130015052 ECH
Aip06g03334 06 130012204 130015052 Aip08g03057 08 120259521 120263062 PCT