Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02992 ATGTTCAAGCAATTCCTCAGCAAGCTCCCTCGCAACAAGAAGCTCGATGCTGATGAGTCAAGCCAAGTTAATTCATCCTCTGAGCCAAGCTCCTCCATGGACATCCCCGAATCCCCACGTGCCGCTGGTAAAAACCACCATACAGACCGTGGCAGCTCTTCCAACGCAAAGCGGGCGTCTTCTATTTTTCCAGAAAGCGCCATTTCAGGGATTGAAGCCTTGATCCCTTTCAAGGATGTTCCACCCTTGGAGAAGATGAACCTCTTTGTTAGCAAGCTCAACCTTTGTTGTGTCACCTTCGATTTCACCAACCCAAGTAAAAACACTGTCGAAAAGGACATAAAAAGAAGAACTTTGATTGAACTCGTTGATTTTGTAGCTTCTGGCTCTATTAAATTCACTGAGCCGGCTATTCTAGCAATGTGTAGAATGTGTGCCATCAACTTATTCCGTGTTTTCCCACCAAATTACCGGTCTCGGCAGTTGTCCGGTGGATCCGGTGGCAGAGATGGCGAGAATGATGATGATGAGCCATCTTTTGATCCTTCTTGGCCACACTTGCAAATTGTGTATGACTTGTTGCTTAAGTTTGTTAGCTCCCCTTGTCTTGATGCAAAGGTGGCAAAGAAATACATTGATTGTTCATTTATTTCGAGATTGCTAGAGTTGTTTGATTCAGAGGATCCTAGGGAGAGGGATTGCTTAAAAACCATAATGCATAGGGTTTATGGTAAATTCATGGTGCACAGGCCTTACATAAGAAAGTCCATTAACAATGTGTTCTTTAGGTTTGTGTTTGAAACTGAGAGGCACAATGGGATTGCTGAGTTGTTAGAGATCTTTGGAAGCATAATTAGTGGTTTTGCTTTGCCTTTGAAGGAGGAGCACAAGATCTTCTTATGGAGGGTGTTGATCCCCTTGCACAAGCCCAAATCCCTGGGGGTATACTACCAGCAATTGTCCTATTGCATCACTCAATTTATAGAGAAAGAGCCAAAGTTGGCGAGTACCGTCATTAGAGGATTGTTGAAATATTGGCCTATAACCAATAGTCAGAAGGAGGTGATGTTCCTTGGTGAATTGGAAGAAATTCTGGAAGTGATTAACATGGTAGAGTTCCAGAAGGTCATGCTGCCGTTGTTTTGGCGAATTGGATGCTGCATTAAAAGTTCTCATTTTCAGGTAGCTGAAAGAGCCCTTTTCTTGTGGAACAACGACCACATCGTCAACCTGATCGCTCACAACCGTCAGGTAATCTTGCCGATCATATTACCGGCATTAGATAGGAATTGTCAAGCCCATTGGAACCAGGCAGTTCTCAACTTAACTCTCAATGTTAGGAAGATATTTGTAGAGATGGATGAGAAGCTGTACGTTTCGTGCCTTGCTCGGTTCAAAGAGGAAGAAGCAAGGCAAAGCTCGGAAGCCGAGAAGCGGAAGGAAGCATGGAAACAACTCGAGAAAGCGGCTGGTGTCCGACCAGAGATTGGAAACACAACTGTTTTAGTTTAG 1512 0.4411 MFKQFLSKLPRNKKLDADESSQVNSSSEPSSSMDIPESPRAAGKNHHTDRGSSSNAKRASSIFPESAISGIEALIPFKDVPPLEKMNLFVSKLNLCCVTFDFTNPSKNTVEKDIKRRTLIELVDFVASGSIKFTEPAILAMCRMCAINLFRVFPPNYRSRQLSGGSGGRDGENDDDEPSFDPSWPHLQIVYDLLLKFVSSPCLDAKVAKKYIDCSFISRLLELFDSEDPRERDCLKTIMHRVYGKFMVHRPYIRKSINNVFFRFVFETERHNGIAELLEIFGSIISGFALPLKEEHKIFLWRVLIPLHKPKSLGVYYQQLSYCITQFIEKEPKLASTVIRGLLKYWPITNSQKEVMFLGELEEILEVINMVEFQKVMLPLFWRIGCCIKSSHFQVAERALFLWNNDHIVNLIAHNRQVILPIILPALDRNCQAHWNQAVLNLTLNVRKIFVEMDEKLYVSCLARFKEEEARQSSEAEKRKEAWKQLEKAAGVRPEIGNTTVLV 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02992 503 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 76 490 IPR002554 GO:0000159|GO:0007165|GO:0019888
Aip08g02992 503 SUPERFAMILY ARM repeat 87 485 IPR016024 -
Aip08g02992 503 PIRSF PP2A_B56 4 502 IPR002554 GO:0000159|GO:0007165|GO:0019888
Aip08g02992 503 Gene3D - 81 489 IPR011989 -
Aip08g02992 503 Coils Coil 466 486 - -
Aip08g02992 503 MobiDBLite consensus disorder prediction 19 34 - -
Aip08g02992 503 MobiDBLite consensus disorder prediction 1 59 - -
Aip08g02992 503 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 503 - -
Aip08g02992 503 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 503 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02992 Aip-Chr8 118760441 118762382 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02992 K11584 - gmx:100781390 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g02992 08 118760441 118762382 Aip08g02992 08 118760441 118762382 ECH
Aip06g03298 06 129377191 129379923 Aip08g02992 08 118760441 118762382 PCT