Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03298 ATGCTCAAGCAATTTCTTAGCAAGAAGTCTCAAAAATCGCTAAAATATGATTCGGACAAGTCGAGTCGAAGCGACTCTTCACCTTCCACCATTGATTCGTCACGCGCCCTTATTAGAACGGGCTGTTGGTCGCACATTGATGAAGATTCTTCCTTAGCACAAGCTAGCACCACAAAAGAATCTTCAGTTCCATTATTTCTTTTGATGAATATGACAGTTGGGATTACTCAACCTTCCATGCCATTCAAGGATGTTCCCAATAATGATGAAAAGTTGAATCTATTCATGAGTAAGTTGAGCCTTTGCTGTGTCACATTTGATTTTACAAACCCTAATTGCAACAAAGACATAATGATGCAAAGAGATCTAAAGAGGAGAATTTTGATTGAACTTGTTGATTTTGTGGCCTCTTGGTATGATGGTAATAACAAGTTTAATGAAACTACCATCCTTGCCATGCGTGGGATGTTTACCATAAACCTATTTAGGGTTTTTCCACCGAATTATAGTGATGATGGCGAACCTAGATTCGACTCGGCCTGGCCTCATCTTCAATTTGTTTACGAGTTATTGCTTAAATTCATCACTTCACCGGGTCTAGATGTAAAAATTGCGAAGAAATACATCGATTATTCATTTATATTGAAGTTGCTCGATTTATTCGAATCCGGGGATCCAAGAGAAAGAGATTGCTTGAAGACAATTCTACATAGGCTCTATGGGAAATTCACAATGCATAGATCATATATTCGAAAATCAGTTAACAACATATTCTACAGTTTTGTGTATGAGAATGAGAAACACCGTGGGTTTGGTGAGTTGTTAGAGTTTTATGGAAGTGTGATTAGTGGGTTCACTTTGCCATTAAAGGAGGAACACAAGATATTTTTGTGGAGAGTTTTGATCCCATTGCATAAGCCAAAATCTTTGGGAGTGTATTTTCAGCAATTATCATATTGTATAATGCTATTTATAGAGAAAGAGCAAAAGTTATCAAGCATTGTGATAAGGGGTTTGTTAAAATATTGGCCAATAACAAATAGCCAAAAGGAGGTGTTGTTCTTGGGTGAAATTGAAGAAATTTTGGAATCAATTCATATGGTAGAGTTCCAAAGGATCATGGTCCCATTGTTTTGGCGAATTGGGTGTTGCATTAATAGCTCACACTCTCAGGTAGCTGAAAAGAGTCTTTTGTTATGGAACAATGAGCGCATTGCGAATTTAATTGCTCAAAACTGCCAAACAATCCTACCTATCATATTTCCAGCTTTAGAGAGAAATATTAAAAGCCACTGGAACTCAGAAGTTGTGACTTTAACTCATAACATTAGAAAGACTTTCTTGGACATGGATAAGAAGTTGTTCCTTTCTTGTCATTCTCGACTCAAGGAGCAAAAGGTCATTTTGAACTTAGAAGCTGAGAAGCGAAAGGAAGCTTGGAAACGACTAGACCATGTAGCTAGTCTCAAGCATCCTCTCATTGGAAATAATAATCATAATAATTCTACTATTTCTTCATTTTCTCCTTCTAAGACCTCATGA 1542 0.3696 MLKQFLSKKSQKSLKYDSDKSSRSDSSPSTIDSSRALIRTGCWSHIDEDSSLAQASTTKESSVPLFLLMNMTVGITQPSMPFKDVPNNDEKLNLFMSKLSLCCVTFDFTNPNCNKDIMMQRDLKRRILIELVDFVASWYDGNNKFNETTILAMRGMFTINLFRVFPPNYSDDGEPRFDSAWPHLQFVYELLLKFITSPGLDVKIAKKYIDYSFILKLLDLFESGDPRERDCLKTILHRLYGKFTMHRSYIRKSVNNIFYSFVYENEKHRGFGELLEFYGSVISGFTLPLKEEHKIFLWRVLIPLHKPKSLGVYFQQLSYCIMLFIEKEQKLSSIVIRGLLKYWPITNSQKEVLFLGEIEEILESIHMVEFQRIMVPLFWRIGCCINSSHSQVAEKSLLLWNNERIANLIAQNCQTILPIIFPALERNIKSHWNSEVVTLTHNIRKTFLDMDKKLFLSCHSRLKEQKVILNLEAEKRKEAWKRLDHVASLKHPLIGNNNHNNSTISSFSPSKTS 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03298 513 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 81 486 IPR002554 GO:0000159|GO:0007165|GO:0019888
Aip06g03298 513 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 497 - -
Aip06g03298 513 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 497 IPR002554 GO:0000159|GO:0007165|GO:0019888
Aip06g03298 513 MobiDBLite consensus disorder prediction 1 32 - -
Aip06g03298 513 PIRSF PP2A_B56 3 512 IPR002554 GO:0000159|GO:0007165|GO:0019888
Aip06g03298 513 Gene3D - 87 486 IPR011989 -
Aip06g03298 513 SUPERFAMILY ARM repeat 93 482 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03298 Aip-Chr6 129377191 129379923 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03298 K11584 - gmx:100781390 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03298 06 129377191 129379923 Aip06g03298 06 129377191 129379923 ECH
Aip06g03298 06 129377191 129379923 Aip08g02992 08 118760441 118762382 PCT