Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g02947 ATGGCTGATGATAAAGCAGTTGGGGAAGATGAAAAGAAAGAGCCAAGTACTACTGCCACCAAAAATGTGAGACAGAAGCGCAGAGGGTTCCTTTCCGGAATTTGGAATGGACTATTTAGGTTACATGGGGATGATTTTGAGAAGAGGCTCCAATACATATCTAAAGAAGAGGCTGCAGTTCTTTCTAGAATGAAAAGGAGGTCACGATCCTGGAGGCAGATATCTTGGAATGTAATTGTATTTTCTGTTATATTAGAGGTCATTGCTGTAGTTTATGCTATCATGACAACAAGATCTGTGGATATGAATTGGAAGATGAGGGCAGTCCGGGTTTCGCCAATGTTTCTTTTGCCTGTATTAGCATCTGCAGCATATTCAACCTTTGTTAGCTTTGTGAGGATTTGTGATCGCAGGGACGAGAAAATTCTTGTAAGGCTTAGAGAAGAAAGGCAAGCAAAAATTGATGAGCTGAAGGAAAAGACAAATTATTACACTACACAACAGCTCATTCAGAGATATGACCCAGATCCAGCCGCAAAAGCAGCTGCGGCAACTGTTTTGGCATCTAAGTTGGGTGCAGAATCAGGTTTGAGGGTGTATATGGGAGATGAATTAAATCCCACTGCTACAATGGGGAGGAGCAATGATGTTGAACTTGTACAGTCAAATGGACTTCGAAATCGAAAACAACCTCACGCTAGATCCTCTAGTTCAGGGGCAACTACTCCATTTAATCCTGATCAACAACATTTAGTTGGAGGATCCGGGGGACTTGATCAAACTCAGACTTCTGAGTATAATCAGCTTGTTGTTGAGCATCACCAACCACAAAGTTCAACCTCACAAGATGGAGGATGGCTTGCTAAAATTGCAGCGTTGCTTGTGGGCGAGGATCCTACCCAGTCTTATGCTCTCATATGTGGCAACTGCCATATGCATAATGGTCTAGCTCGGAAGGAGGATTTCCCATATGTAACATACTATTGCCCCCACTGTCATGCCCTCAATCAACCAAAGCAATTAGATGGCAATATCTCCCGGGCATCCCCAAGAATGGGGTCTCCGAAAGCTTATGAAAGTGAGGCAGTAAAATATGCTAGCGGTTCTGCAGCTGAGAGCATGCTATTCACAAGCAATAACCCCGTAGATGTTAGTGCTTCTGCAACTGAGAGCACAATCACAAGCAATAGCCCCGTTAATGCTAGCCCTGAGATTGAGGAAGTATCAGAAAGGACGAGTTCGGAAGATAAAGCTGATTAA 1260 0.4349 MADDKAVGEDEKKEPSTTATKNVRQKRRGFLSGIWNGLFRLHGDDFEKRLQYISKEEAAVLSRMKRRSRSWRQISWNVIVFSVILEVIAVVYAIMTTRSVDMNWKMRAVRVSPMFLLPVLASAAYSTFVSFVRICDRRDEKILVRLREERQAKIDELKEKTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGAESGLRVYMGDELNPTATMGRSNDVELVQSNGLRNRKQPHARSSSSGATTPFNPDQQHLVGGSGGLDQTQTSEYNQLVVEHHQPQSSTSQDGGWLAKIAALLVGEDPTQSYALICGNCHMHNGLARKEDFPYVTYYCPHCHALNQPKQLDGNISRASPRMGSPKAYESEAVKYASGSAAESMLFTSNNPVDVSASATESTITSNSPVNASPEIEEVSERTSSEDKAD 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g02947 419 MobiDBLite consensus disorder prediction 385 419 - -
Aip08g02947 419 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 13 416 IPR040115 GO:0071786
Aip08g02947 419 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 13 416 - -
Aip08g02947 419 MobiDBLite consensus disorder prediction 1 21 - -
Aip08g02947 419 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 286 336 IPR019273 -
Aip08g02947 419 MobiDBLite consensus disorder prediction 1 23 - -
Aip08g02947 419 MobiDBLite consensus disorder prediction 385 407 - -
Aip08g02947 419 MobiDBLite consensus disorder prediction 225 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g02947 Aip-Chr8 117868031 117872564 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g02947 K23292 - gmx:100797087 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03280 06 129144360 129149086 Aip08g02947 08 117868031 117872564 PCT