Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03280 ATGGGTGAGGAGAATAAGGTAGTTGGAGAAGGTGAGAAGAAGAAAGAGGAAAGTGTTGGTGCCACTGCTGTTGTTGGTGATGGAGAGGAGGAAAAGAATAATAAGAAGAAGAAGAGTAAGAAGCAGGGGTTAATTTCTCGAATTTGGAACGGGATTTTCAGAAGACGTAGCGATGATTTCGAGAAGAGGCTGCAGTATATTTCCAAAGAGGAAGCTGCGGTTATGGCCAGGGTCAATCGGAGAAACCGGTCGTGGCGGAGAACTTCGCGCCAGATCATCATAATTTCTGTTATATTTGAGGCCGTTGCTGTAGGTTTTGCAATCATGACAACTAGATCAATGGATATGAATTGGAAGATGAGAGCAATCCGAGTTTTGCCAATGTTTCTTTTGCCTGCCTTGTCATCTGCTGTTTATTCAACGTATGTTAGCTTCACAAGGATGCGTGATCGCAAGGACCAGAAAATTCTTGTAAAGCTTCGGGCTGAAAGGCAGGCAAAAATTGATGAGCTCAAAGAAAAGACAAATTATTACATTACTCAACAACTCATTCAGAGATATGACACAGATCCAGCAGCAAAGGCAGCTGCTGCAACTGTTTTGGCATCCAAGTTGGGTGCAGATTCTGGCTTGAAAGTGTACGTGGGAGATGAATCTAACTCTGCTGCTCCAACAGGGCAGAGCATTGATGCTGATCCTGCAAGGTCTAGTGGACTTAGAAATCGGAAAACAGTGCATTCTAGATCCATTAGTTCTGGGACATCTACTCCAAATGTTCCTGATCAACAACTAGTTGGTGCTGCCGGAACTGATCAAACCCTTACTTCTGAGCACAATCAGCTTGTAGTTGTTGAACATCACCAACCTCAAAGTTCAACATCACAAGATGGGTGGATTGCTAGAATCGCAGCATTGCTTGTAGGTGAGGATCCAACACAGTCATATGCACTCATATGCGGTAACTGCCATATGCATAATGGTCTTGCTCGGAAGGAGGATTTCCCATTTATTACTTACTATTGCCCACACTGTCGCGCCTTAAACAAACCAAAGCAATCAGATGAGCGTGTCTCCAGTGGTAACTCCCCAAATATGAGGTTTCCAAAAACAGATGATGGTGAAGCAGTAGTTAAAACTGTTAGTGCTTCTGCTGCTGACAGCATAATCAAAAGCAATAATCCCTTAGATACTGCTACCCCTGAGATTGAAGAAGTATCCGAAGTGGCTAGTTCAGGGGAGAAAAATAGTTAA 1251 0.4349 MGEENKVVGEGEKKKEESVGATAVVGDGEEEKNNKKKKSKKQGLISRIWNGIFRRRSDDFEKRLQYISKEEAAVMARVNRRNRSWRRTSRQIIIISVIFEAVAVGFAIMTTRSMDMNWKMRAIRVLPMFLLPALSSAVYSTYVSFTRMRDRKDQKILVKLRAERQAKIDELKEKTNYYITQQLIQRYDTDPAAKAAAATVLASKLGADSGLKVYVGDESNSAAPTGQSIDADPARSSGLRNRKTVHSRSISSGTSTPNVPDQQLVGAAGTDQTLTSEHNQLVVVEHHQPQSSTSQDGWIARIAALLVGEDPTQSYALICGNCHMHNGLARKEDFPFITYYCPHCRALNKPKQSDERVSSGNSPNMRFPKTDDGEAVVKTVSASAADSIIKSNNPLDTATPEIEEVSEVASSGEKNS 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03280 416 MobiDBLite consensus disorder prediction 390 416 - -
Aip06g03280 416 MobiDBLite consensus disorder prediction 243 264 - -
Aip06g03280 416 MobiDBLite consensus disorder prediction 1 40 - -
Aip06g03280 416 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 298 348 IPR019273 -
Aip06g03280 416 MobiDBLite consensus disorder prediction 220 234 - -
Aip06g03280 416 MobiDBLite consensus disorder prediction 350 374 - -
Aip06g03280 416 MobiDBLite consensus disorder prediction 1 20 - -
Aip06g03280 416 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 26 413 IPR040115 GO:0071786
Aip06g03280 416 MobiDBLite consensus disorder prediction 220 264 - -
Aip06g03280 416 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 26 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03280 Aip-Chr6 129144360 129149086 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03280 K23292 - gmx:100815496 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03280 06 129144360 129149086 Aip08g02947 08 117868031 117872564 PCT