Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01182 ATGCCAACGACACCGTTCTCGGACTCCGACGAGCTCCGTATGCCGCTGGTGGCGGTGGCAGCAAAGGAGGCGGAGACGGAGAAGCTTTGCATCGACGAGATGCTTCGAAAGTATTGCGGCGAGTTCGGAAAGTGGCAGTTGAGACACTTCATCTTCACAAGCCTCGCGTGGGCGCTGGAGGCCTTCCACACCATGGTCATGATCTTCGCCGACCGTGAGCCGGAGTGGCGATGTACCGCCACCACCTCCGCTGCCTGCGGAGTGGTTGGGAGCACCTGCGAAATCCGGCCGGATGACTGGGAGTGGATTGGTGGACGCGGCGGCGCCACCGTGTCAGAGTGGGGACTTGTTTGCGGCGACAAATTTAAAGTTGGGCTCGTCCAGTCCTTATTCTTTGCCGGATGTATGATTGGTGCTGGAATATTTGGTCACCTCTCAGATTCTTTTCTTGGAAGAAAAGGTTCACTGATGGTTGTTTGTGCCTTAAATGCCATTTTTGGTTGTCTCACAGCATTCTCGCCAAATTATTGGATCTACGTCATTTTCCGCCTCCTCACCGGCTTCAGCACCGGCGGTGTTGGCCTATGCGCATTTGTCCTTGCCACCGAGCCAATTGGCCCAACAAAACGTGGTATCGCCGGAATGTCCACTTTCTACTTTTTCTCCATCGGCATTGCAATCCTCTCCGCCGTTGCCTACATCTTCCAAACATGGCGTGCGCTTTACATTGCGTCCTCCATCCCCTCCATTCTCTTCGTCTTCCTCGTCATCCCTTTTCTCTCAGAGTCTCCAAGATGGTACCTCGTTCGTGGAAGAGTAACCGAAGCCATGAAGATCATGTCCAATATTGCTTCTACCAATGGAAAGCACCTCCCTAGTGGTGTTCTTCTTGCACTTGACGAAGAAACCGAAGTACAAGCAGAAGCAAAAACGGAAGCACTAACCTTGACCTATAAGAACAACAACAACAAGTCTTTGGAAAACAAAGATGCAGTTGGTGGTTCTATTGTTGACGTCCTTCGCTCTCCAGTCACTAGAATAAGGTTGATTCTAATGGTGGCAATCAACTTCTTTTGCTCTGTTGTGTACTATGGTCTGAGCTTGAACGTGGTAAATCTTGATACCAACCTTTACATGAACGTGGCGTTGAATGCAGTGGCAGAGATGCCGGCGTTTGGGATAACGGCGATTTTGTTGGACAAGTTTGGGAGGAAGCCGTTGGCAATAGGGACAATGTGGTTCAGCGGTTTGTTTTGTTTGTTAGGTAGTTTAATGGGTAATGTTGGAGTGTGGAAGTTAATTAGAATGGTGTGTGGTATTTTGGGGATATTTGGGATGGCCGGAACTTATAATTTATTGTTTATTTACACGGCGGAGTTGTTCCCTACGGTGGTCAGGAACGCAGCACTTGGGTGCGCCACGCAGGCGGTGCAAATGGGGGCAATATTGTCGCCGGTGGTGGTGGTTTTGGGCGGTTGGCTGCCGTTCGCGGTGTTTGCTGTGTGTGGAATAGTGGGTGGCATGTTTGCATTTTATTTGCCGGAAACTTTGAATCAGCCCTTATATGATACATTCTCTGGATTGGAAGCTGGGCTTGTTTGA 1602 0.5012 MPTTPFSDSDELRMPLVAVAAKEAETEKLCIDEMLRKYCGEFGKWQLRHFIFTSLAWALEAFHTMVMIFADREPEWRCTATTSAACGVVGSTCEIRPDDWEWIGGRGGATVSEWGLVCGDKFKVGLVQSLFFAGCMIGAGIFGHLSDSFLGRKGSLMVVCALNAIFGCLTAFSPNYWIYVIFRLLTGFSTGGVGLCAFVLATEPIGPTKRGIAGMSTFYFFSIGIAILSAVAYIFQTWRALYIASSIPSILFVFLVIPFLSESPRWYLVRGRVTEAMKIMSNIASTNGKHLPSGVLLALDEETEVQAEAKTEALTLTYKNNNNKSLENKDAVGGSIVDVLRSPVTRIRLILMVAINFFCSVVYYGLSLNVVNLDTNLYMNVALNAVAEMPAFGITAILLDKFGRKPLAIGTMWFSGLFCLLGSLMGNVGVWKLIRMVCGILGIFGMAGTYNLLFIYTAELFPTVVRNAALGCATQAVQMGAILSPVVVVLGGWLPFAVFAVCGIVGGMFAFYLPETLNQPLYDTFSGLEAGLV 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01182 533 Gene3D MFS general substrate transporter like domains 47 525 IPR036259 -
Aip08g01182 533 ProSiteProfiles Major facilitator superfamily (MFS) profile. 49 518 IPR020846 GO:0022857
Aip08g01182 533 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 31 530 - -
Aip08g01182 533 ProSitePatterns Sugar transport proteins signature 1. 395 411 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aip08g01182 533 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 31 530 - -
Aip08g01182 533 ProSitePatterns Sugar transport proteins signature 2. 185 210 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aip08g01182 533 SUPERFAMILY MFS general substrate transporter 120 521 IPR036259 -
Aip08g01182 533 Pfam Sugar (and other) transporter 120 522 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01182 Aip-Chr8 16658334 16662704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01182 1 529 Organic Solute Cotransporters AT3G20660 67.105 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01182 K08202 - gmx:100797665 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01182 08 16658334 16662704 Aip08g01182 08 16658334 16662704 ECH
Aip08g01182 08 16658334 16662704 Aip03g01953 03 26733540 26738539 PCT