Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01953 ATGGCAGCAACGACGTCTTCCCATGATGAAATAAAAAAGGCTGCACCGGAGCCGGAGCTCCAATCTCCTCTAATACCTTCCAGTGTCGCGGCCAACGGAGGCATGAGACCGCCAGAGAAGCTCTGCTTCGACGAGATGCTTCAGATGTATTGCGGCGAGTTCGGAAGGTGGCAGATGAGGCACTTTGTCTTCACAACCTTCGCGTGGGCGCTCGAGGCCTTCCATACGATGGTCATTATCTTTGCAGATCGTGAGCCGGAATGGAGGTGCGTTCCCGGTTCCAAATGCGATCCGGCCGCAAGTACCGTGTGCGACTTGGAACCTGGAACATGGGAGTGGGTCGGAGGACCGCGTATGTCGACGGTGTCGGAGTGGGGCTTGATTTGTGGCAACAAATATAAGGTTGGACTGGTTCAGGCCGTGTTCTTTGGCGGCTGCATGATCGGCGCTGGAATATTTGGCCACCTCTCAGATTCAAATCTTGGAAGGAAAGGTTCCCTCACTATGGTTTGCATCCTAAACACCATCACCGGAACGCTAACATCACTCGCTCCTAACTACCTCTCCTACGTCACTCTCCGCTTCCTCACCGGCTTCAGCACCGGCGGCGTTGGCCTTTGCGCCTTTGTCCTCGCCACCGAGCCGATAGGGCCCACAATGCGCGGCGTGGCCGGCATGTCCACATTTTACTTCTTCTCTTCCGGCATCGCCCTCCTCGCCGGCATCGCCTACCTCTTCCCAGAATGGCGCCAACTCTACATCGCCTCCACCCTGCCATCTCTTCTCTACATCCTCTTTGTTCTTCCCTTCGTCTCCGAGTCACCAAGATGGTACCTCGTGAAGGGAAGAATCAAAGCGGCCATGGCGATCATGTCCGCCATTGCGACCACCAACGGCAACCACCTCCCGCCAGGTGTTATTCTGGCCCTCGACGAGGACTTGTGTTCGCCAGCAGTGACACCGGCTATAAAGAACAAAGAAGCAGTATCGGGTTGTGTAGTGGACATTATTCGCTCGCGAGTAACGCGCACGCGCTTGTTCCTTTCAGTGGCTATAAACTTCATGTGTTCCGTGGTGTACTACGGCCTCAGCCTCAACGTAGTAAACCTTGGAACCAACCTTTACCTTAACGTCATATTGAACTCTATATCTGAGATGCCAGCTTTCATGTTAACAACTTTGTTTTTGGATAAGTTAGGGAGGAAGCCATTGACCATATTAACCCTGTGGTTTAGTGGGTTCTTTTGCTTTCTAGGGTCCCTAATAGGAAACAAAGGGGCATGGCAAGGTGTTAGAATGGTGTGTAGTATTTTAGGTATATTTGGAATGGCAGGGACTTATAACTTGTTGTTTATTTATACGGCGGAACTGTTCCCCACCGTGGTGAGGAACGTGGCGCTTGGGTGCACCACCCAAGCATCGCAGATGGGCGCCATTTTGGCTCCCGTCGTCGTGATTTTGGGAGACTGGTGGCCATTTGTGGTGTTCACAGTTTGTGGGATGAGTGGAGGAATGTTTGCGTTTTACTTGCCAGAGACTCTGAACCAACCGCTCTATGATACGTTAACTGGAATGGAGGCTGCTGAGAATGATGAATCTGATGCCACAACAAGTGTCTGA 1620 0.5228 MAATTSSHDEIKKAAPEPELQSPLIPSSVAANGGMRPPEKLCFDEMLQMYCGEFGRWQMRHFVFTTFAWALEAFHTMVIIFADREPEWRCVPGSKCDPAASTVCDLEPGTWEWVGGPRMSTVSEWGLICGNKYKVGLVQAVFFGGCMIGAGIFGHLSDSNLGRKGSLTMVCILNTITGTLTSLAPNYLSYVTLRFLTGFSTGGVGLCAFVLATEPIGPTMRGVAGMSTFYFFSSGIALLAGIAYLFPEWRQLYIASTLPSLLYILFVLPFVSESPRWYLVKGRIKAAMAIMSAIATTNGNHLPPGVILALDEDLCSPAVTPAIKNKEAVSGCVVDIIRSRVTRTRLFLSVAINFMCSVVYYGLSLNVVNLGTNLYLNVILNSISEMPAFMLTTLFLDKLGRKPLTILTLWFSGFFCFLGSLIGNKGAWQGVRMVCSILGIFGMAGTYNLLFIYTAELFPTVVRNVALGCTTQASQMGAILAPVVVILGDWWPFVVFTVCGMSGGMFAFYLPETLNQPLYDTLTGMEAAENDESDATTSV 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01953 539 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 44 530 - -
Aip03g01953 539 MobiDBLite consensus disorder prediction 1 32 - -
Aip03g01953 539 ProSiteProfiles Major facilitator superfamily (MFS) profile. 61 515 IPR020846 GO:0022857
Aip03g01953 539 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 44 530 - -
Aip03g01953 539 SUPERFAMILY MFS general substrate transporter 131 518 IPR036259 -
Aip03g01953 539 ProSitePatterns Sugar transport proteins signature 2. 196 221 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aip03g01953 539 Gene3D MFS general substrate transporter like domains 114 521 IPR036259 -
Aip03g01953 539 Pfam Sugar (and other) transporter 133 519 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01953 Aip-Chr3 26733540 26738539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01953 6 539 Organic Solute Cotransporters AT3G20660 64.045 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01953 K08202 - qsu:112025516 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01953 03 26733540 26738539 Aip03g01953 03 26733540 26738539 ECH
Aip08g01182 08 16658334 16662704 Aip03g01953 03 26733540 26738539 PCT