Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00866 ATGAGGCGAAGAGGTGCGGATTTTCGGAGGCCGGTGAGGAGGAGGATCCCTGATGCGTTGTGGTGGGCATTGTGCTGTGGAGTGGTTATCCTCTTTGTCTATATTCTCAGCAAAGGGAACCAGATTGAGTCAAGACCAGCTTTGGCACAGAGAACTTACAAGCATGATAAGATTATGGAAGGCCTTAATATTACTGATGAGATGTTAAGTCCTAACTCGGTGAGCAGACAACTTAATGATCAGATATCCCTAGCAAAAGCTTTTGTCGTGATTGCAAAAGAAAGTAATAATTTACAATTTGCTTGGGAATTAAGTGCCCAGATCCGCAATTCACAAATTCTCCTCTCAAACGCTGCCACCAGGCGAGTTCCTCTATCAACTAGAGAATCTGAAAGTGCTATCCGTGATATGGCATTATTGTTATACCAGGCTCAGCAGCTCCATTATGACAGTGCAACCATGATCATGCGATTCAAAGCAAAAATTCAAGCGCTTGAAGAACAGATGAATTCTGTGACTGAAAAGAGTTCAAAATATGGACAAATAGCTGCTGAAGAGGTCCCGAAAAGTCTATACTGTCTTGGTGTCCGATTGACAACTGAATGGTTCAAAAACCTTAATCTGCAAAATAAATTGAGGGACAAAAGGCAAGTCGAGATGAAACTTAAGGATAACAATCTTTTTCATTTTTGTGTCTTTTCTGACAATATTCTCGCAACTTCAGTTGTTGTCAATTCAACATCGATAAGCTCTAAGAATCCTGATATGATTGTTTTCCACCTTGTAACTGATGAAATAAATTATGCGGCAATGAAGGCATGGTTTGCCATGAATGATTTCCGTGGGGTGACTGTGGAAGTTCAAAAGTTTGAAGACTTCATTTGGTTAAATGCTTCTTATGTTCCTGTGCTTAAGCAACTTCAAGACACAGAAACACAGAGCTATTACTTTTCTGGCAACAGTGGCGATGGCAGGACACCGATCAAGTTCCGTAACCCTAAATATCTATCCATGCTTAACCACCTGAGGTTTTATATACCTGAGGTATTTCCTGCACTAAAGAAGGTGGTGTTCTTGGATGATGATGTTGTAGTTCAAAAGGATCTTTCTGGTCTTTTCTCCCTTGACTTGAAGGGCAACGTCAATGGGGCTGTGGAAACATGCATGGAGACATTTCATAGATATCACAAATATCTAAACTATTCCCATCCTCTGATTCATACACATTTTGATCCTGACGCTTGTGGATGGGCATTCGGGATGAATGTATTTGATTTGGTTGAATGGAGGAAAAAGAATGTTACCGGCATCTACCATTATTGGCAGGAAAAGAATGTCGACCGGACATTGTGGAAACTTGGAACCTTGCCCCCTGGACTGTTGACTTTCTATGGATTAACGGAGCCCTTGGATCCATCATGGCATGTATTGGGTTTTGGCTACACAACCGTTGATCCTCAGTTGATAGAGAGAGGCGCCGTACTTCATTTCAATGGGAACTCCAAACCATGGTTGAAGATCGGCATTGAGAAGTACAAGCCCCTTTGGGAAAAATTTGTTGACTACTCTCATCCTTTGTTGCAACAGTGCAATTTCCATTGA 1602 0.4157 MRRRGADFRRPVRRRIPDALWWALCCGVVILFVYILSKGNQIESRPALAQRTYKHDKIMEGLNITDEMLSPNSVSRQLNDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQILLSNAATRRVPLSTRESESAIRDMALLLYQAQQLHYDSATMIMRFKAKIQALEEQMNSVTEKSSKYGQIAAEEVPKSLYCLGVRLTTEWFKNLNLQNKLRDKRQVEMKLKDNNLFHFCVFSDNILATSVVVNSTSISSKNPDMIVFHLVTDEINYAAMKAWFAMNDFRGVTVEVQKFEDFIWLNASYVPVLKQLQDTETQSYYFSGNSGDGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSGLFSLDLKGNVNGAVETCMETFHRYHKYLNYSHPLIHTHFDPDACGWAFGMNVFDLVEWRKKNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGYTTVDPQLIERGAVLHFNGNSKPWLKIGIEKYKPLWEKFVDYSHPLLQQCNFH 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00866 533 CDD GT8_like_1 228 521 - -
Aip08g00866 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 229 531 IPR029044 -
Aip08g00866 533 PANTHER GALACTURONOSYLTRANSFERASE 10-RELATED 4 533 - -
Aip08g00866 533 Coils Coil 155 175 - -
Aip08g00866 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 4 533 IPR029993 GO:0047262
Aip08g00866 533 Pfam Glycosyl transferase family 8 234 507 IPR002495 GO:0016757
Aip08g00866 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 229 526 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00866 Aip-Chr8 9383872 9387254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00866 1 533 Glycosyltransferase AT2G20810 79.478 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00866 K13648 - gmx:100792018 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00866 08 9383872 9387254 Aip08g00866 08 9383872 9387254 ECH
Aip08g00866 08 9383872 9387254 Aip03g01678 03 20266501 20269109 PCT