Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01678 ATGAGGCGAAGAGGTGCGGATTTTCGAAGGCCAGTGAGGAGGAGGGTGCAGGATGTGGCGTGGTGGACACTCTGTAGCGTAGTAGCTCTCTTATTTATTTATATTCTTGTCACCACCACCAAAGGCTCCAACACTACTAGTACTACCTCAATGCCCCCTTTCTCCTTGAGAAACTTCAGGAATGAAAGGATCATGGAAAGCCTTAATATTACTGAAGAGATGTTAAGCCCTGACTCAGTAGCAAGACAACTAAATGATCAAATATCTCTAGCAAAAGCCTTTGTTGTAATTGCCAAAGAAAGTAACAATCTCCAATTAGCTTTGTCCTTAACTTCCCAGATTCAAAATTTGCAGATTCTCCTCTCAAATGCAGCCACCAGGCGCGCTCCCTTGACAATAATGGAGTCAGAGAAAGCGATTCATGATATGGCATCATTGCTGTATCAGGCACAGCAGCTCCATTATGACAGTGCAGGCATGATCATGAGACAGAAAGCAAAGATTGAATCTCTTGAAGAACAGATGAATTATGTAAATGAAAAGAGTTCGAAATACGGACAAGTAGCTGCTGAAGAAGTCCCCAAGAGCCTATACTGCCTAGGTGTAAAGTTGACATCAAAATGGTTAAACAATTTCGATTTGCAGAACAAATTGATGGACAAATTGCAATCTGACATGAAACTTAGGGACAACAATCTTTACCACTTTTGTGTGTTCTCTGATAACATCCTTGCTACTTCAGTTGCAATCAACTCGACCGCGCAAAATTCTAAGAATCCAGATAGAATTGTTTTCCACATTGTCACGGATGAAATAAGTTATGCTGTTATGAAGGCATGGTTTGCTTTAAACGATTTTCGTGGTGTGACAGTTGAAGTTCAGAAGTATGAAGACTTCGATTGGTTAAATGCTTCATATGCTCCTGTGCTTAAGCAGCTCCAAGACTCAGAGATCCAGAGCTACTACTTTCGAGGAAGCAAAGACGATGGAAGTACTCCGATCAAGTTTCGGAACCCAAAATATCTCTCCATGCTTAACCACCTAAGATTCTACATACCCGAAGTCTTTCCGGATCTAAAGAGGGTGGTGTTCCTCGACGATGATGTCGTGGTCCAAAAGGATCTTTCTAAGCTTTTCTCAATTGATTTGAATGAAAATGTTAATGGAGCAGTTGAGACATGTATGGAGACATTTCATAGGTACCATAAATACTTGAACTATTCACATCCTTTAATTAGAGCACACTTTGATCCTGATGCATGTGGTTGGGCATTTGGGATGAATGTGTTTGATTTGGTTCAATGGAGAAAAATGAATGTAACTGGAATCTACCACTACTGGCAAGAAAAGAATGTAGATAGAACATTGTGGAAACTTGGAACATTGCCACCAGGGTTGTTAACATTTTATGGATTAACTGAGCCATTGGATCCATCATGGCATGTGTTGGGTTTTGGCTACACCTCTGTGGATCCTGTGTTGATAGAGAAGGGTGCTGTGTTGCATTTCAATGGAAACTCCAAACCATGGTTGAAGATTGGGATGGAAAAGTACAAGCCCTTGTGGGAAAAATACATGGATTATTCTCATCCTTTGTTGCAACAGTGCAACTTTCATTGA 1620 0.408 MRRRGADFRRPVRRRVQDVAWWTLCSVVALLFIYILVTTTKGSNTTSTTSMPPFSLRNFRNERIMESLNITEEMLSPDSVARQLNDQISLAKAFVVIAKESNNLQLALSLTSQIQNLQILLSNAATRRAPLTIMESEKAIHDMASLLYQAQQLHYDSAGMIMRQKAKIESLEEQMNYVNEKSSKYGQVAAEEVPKSLYCLGVKLTSKWLNNFDLQNKLMDKLQSDMKLRDNNLYHFCVFSDNILATSVAINSTAQNSKNPDRIVFHIVTDEISYAVMKAWFALNDFRGVTVEVQKYEDFDWLNASYAPVLKQLQDSEIQSYYFRGSKDDGSTPIKFRNPKYLSMLNHLRFYIPEVFPDLKRVVFLDDDVVVQKDLSKLFSIDLNENVNGAVETCMETFHRYHKYLNYSHPLIRAHFDPDACGWAFGMNVFDLVQWRKMNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGYTSVDPVLIEKGAVLHFNGNSKPWLKIGMEKYKPLWEKYMDYSHPLLQQCNFH 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01678 539 CDD GT8_like_1 234 527 - -
Aip03g01678 539 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 4 539 IPR029993 GO:0047262
Aip03g01678 539 Pfam Glycosyl transferase family 8 241 513 IPR002495 GO:0016757
Aip03g01678 539 SUPERFAMILY Nucleotide-diphospho-sugar transferases 234 537 IPR029044 -
Aip03g01678 539 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 235 534 IPR029044 -
Aip03g01678 539 PANTHER GALACTURONOSYLTRANSFERASE 10-RELATED 4 539 - -
Aip03g01678 539 Coils Coil 161 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01678 Aip-Chr3 20266501 20269109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01678 1 539 Glycosyltransferase AT2G20810 73.801 0.0 824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01678 K13648 - gmx:100792018 902.894
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01678 03 20266501 20269109 Aip03g01678 03 20266501 20269109 ECH
Aip08g00866 08 9383872 9387254 Aip03g01678 03 20266501 20269109 PCT