Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00786 ATGAAGAAGCCACCAATTCAAAACCTCACCAGACTCCACCCTATAATCAAATTCATCTTAGCCACCATCTCAACATTTTGTGCCATCACTCTCTGTGTTTCAGTGCTACTCTTGGCCACAACAAAGGTAGTCAACGTTGACCATTCATCACATCATGTTTTTGACCCTACAACACTCAATCACCTTGTGTTTGGAATTGCCTCCAGTGGAAAATCATGGCCTAGAAGAAAAGATTACGCAAAGCTATGGTGGAATCACAATAATGGAATGAAAGGGTGTGTTTTTGTCGATACTCTTCCAAGCAATGATACTAATAATTCTTCTTCTCCTCTTCTTCCTCCTCTCTGCGTCTCCGAGGACACTTCGAAATTTCGCTACACTTACCGGCGGGGAGGCCTCCGATCCGCGATCCGTGTGGCGCGTGTTGTTAAAGAGATTGTGGCATTGAACCATTCTGATGTGAGGTGGTATGTGTTTGGTGACGACGACACGGTGTTCTTGCCGGAGAATCTTGTGAAGATTCTGTCAAAGTATGATCATAGGCTTTGGTACTATGTTGGTGCACACACTGAGATGTATGAAGGGTGCCAGGTTTTTGGTTTTGGAATGGCCTTTGGCGGTGGCGGTTTTGCTATAAGTGCTCCTCTGGCGAAAGTGCTAGCCAAGGTTTTTGATTCTTGTATAGAAAGGTATACTCATCTATATGGAAGTGATGCAAGGGTCTACTCTTGCATAACAGAACTTGGAGTTGGCTTAACACATGAACCTGGTTTTCATCAGGTTGATCTAAGGGGAAACATCTTTGGCCTATTGGCTGCTCATCCAATGACTCCTTTGTTGTCCCTACACCATCCAGAAGCCATAGATTCAATATTTCCCAACATGACAGCAAAAGGGGCTCTTCAACACTTATTTGAAGCTGTAAAGGTTGATTCCCAAAGGGTGCTACAACAAACCGTTTGCTATGACAATGAATCTTCATGGACAGTTTCAGTGTCATGGGGATATGCTGTCCAAGTTTTCCATAACAACTTGCCCTTGCCAGAGGCAGTGAGAGTCCAAAAGACTTTCAAGCAGTGGAAGGAAGGAGGGAGTGTTGTTGGAGGAATATACACTTTCAACACAAGAGATGTTCACTCTGATCCATGTACAAGACCCTCTGTTTTCTACCTAGATAAGGTTTCTTATGGTAAAGATTTCTTCATCATGAGCAATTACAAGAAATCTTTTCAAAATTGCTCACATGACATGCCAACTAAGAAACTTGAAGTGATCAAAGTGGTCACAAATAAGCTTGACCTTGACATCAAAAAGTTGCAGAGTCCTAGGAGGCACTGTTGTGATGTATTGCGCTACACAACAGGTGACATGATGGAAGTTGCAATCAGAGAGTGTAAAGATGAAGAATTGATTTACATGCACTGA 1425 0.4288 MKKPPIQNLTRLHPIIKFILATISTFCAITLCVSVLLLATTKVVNVDHSSHHVFDPTTLNHLVFGIASSGKSWPRRKDYAKLWWNHNNGMKGCVFVDTLPSNDTNNSSSPLLPPLCVSEDTSKFRYTYRRGGLRSAIRVARVVKEIVALNHSDVRWYVFGDDDTVFLPENLVKILSKYDHRLWYYVGAHTEMYEGCQVFGFGMAFGGGGFAISAPLAKVLAKVFDSCIERYTHLYGSDARVYSCITELGVGLTHEPGFHQVDLRGNIFGLLAAHPMTPLLSLHHPEAIDSIFPNMTAKGALQHLFEAVKVDSQRVLQQTVCYDNESSWTVSVSWGYAVQVFHNNLPLPEAVRVQKTFKQWKEGGSVVGGIYTFNTRDVHSDPCTRPSVFYLDKVSYGKDFFIMSNYKKSFQNCSHDMPTKKLEVIKVVTNKLDLDIKKLQSPRRHCCDVLRYTTGDMMEVAIRECKDEELIYMH 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00786 474 Pfam Protein of unknown function, DUF604 198 447 IPR006740 -
Aip08g00786 474 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 13 472 - -
Aip08g00786 474 PANTHER FRINGE-RELATED 13 472 - -
Aip08g00786 474 Gene3D - 52 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00786 Aip-Chr8 7982638 7984483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00786 56 439 Glycosyltransferase AT1G05280 53.333 4.65e-151 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00786 - - adu:107461911 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00786 08 7982638 7984483 Aip08g00786 08 7982638 7984483 ECH
Aip08g00786 08 7982638 7984483 Aip03g01583 03 17909014 17911102 PCT
Aip03g01582 03 17901970 17904867 Aip08g00786 08 7982638 7984483 PCT