Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01582 ATGTTCCAGCGAAGAAAACCTAGTACAGAGTCCCACCAACAATCTCCACGCGCTCCTCGACATTCGTGCCCACCACGCGCCCCTCAACATTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCGTTTCCTGGCCCCGCCGCCATCCCTACCTCCGCCTCTGGTACTCTCCAAACACCACGCGATCACTCGCGTTCCTCGATTCGCCGCCAGCTTCGGATTCCTCCTCGTCCTCCTCTTCGTTGCCATCGGTGGTGATCAACGGCGATACCTCACGGTTCCCGTACACGTTCCGGGGAGGGCTCCGGTCGGCGATCCGGGTGGCGCGTGTGGTGAAAGAGGCAGTGGAGAGGGGGGAGAAGGAGGTGCGGTGGTTCGTGTTCGGCGACGACGACACAGTGTTCTTAGTGGAGAATGTAGTGAGTGTATTGTCGAAGTACGATCATGATCGGTGGTACTATGTTGGGAGCAATTCGGAGAGCTATGAGCAGAATGAGAAGTACTCGTTTGAGATGGCGTTCGGTGGTGGCGGTTTCGCTGTGAGCCACGCGCTTGGTAGGGTTTTGGCTAGGGTTTTGGATTCTTGCTTGAAGAGGTATGGCCACTTGTATGGGAGTGATGCTAGGATCTATTCTTGTGTTGCTGAGCTTGGTATTGGATTAACACATGAACCTGGCTTTCATCAGTTAGATATGCGGGGTGATTTGTTTGGGATTCTAGCTGCACATCCATTATCTCCATTATTGTCCCTTCATCACTTGGAGGCAGTGGAACCTCTCTTTCCCAACATGAACAGAACACAAGCCCTTGAACATCTTATGGCAGCTGCAGCCGTAGACCCTGCAAGGATTTTGCAGCAAACTGTGTGCTATGATCGTTCAAAGTCTTTAACTTTCTCGGTTTCATGGGGTTTTGCCATCCAAGTTTTTGAAGGAAATGAATTTCTCCCCGATCTTCTTCAAGTGCAGAGGACTTTTGTGCCGTGGAAGAGGGGTAGCAAAGTTGTTGGCAAATTTATGTTCAACACGAGAGACTACCCTAGAGATCCTTGTCAAAGACCTTTTCTCTTTTTCATGAAAAGTGTTGAATACGATAAAAGTGGCATTTGGAGTAACTACACCAGGCATGCTGTTGGGAAATGCTTTGAAGAATCAAATTCGGTAAAGCAGCTGAAGAAGATTATAGTTTTCTCGAGGAAGCTAGTGCTTAATGTTGAAGAGTTGAAAGCCCCTCGTCGGCAATGCTGCGATGTTTTGCCGTCTTCCAATGAAACAACAATTATCCATCTTAGACATTGCGGAACTGATGAATTGATCTCCATGTACCAATAG 1335 0.4787 MFQRRKPSTESHQQSPRAPRHSCPPRAPQHSXXXXXXXXXXXSVSWPRRHPYLRLWYSPNTTRSLAFLDSPPASDSSSSSSSLPSVVINGDTSRFPYTFRGGLRSAIRVARVVKEAVERGEKEVRWFVFGDDDTVFLVENVVSVLSKYDHDRWYYVGSNSESYEQNEKYSFEMAFGGGGFAVSHALGRVLARVLDSCLKRYGHLYGSDARIYSCVAELGIGLTHEPGFHQLDMRGDLFGILAAHPLSPLLSLHHLEAVEPLFPNMNRTQALEHLMAAAAVDPARILQQTVCYDRSKSLTFSVSWGFAIQVFEGNEFLPDLLQVQRTFVPWKRGSKVVGKFMFNTRDYPRDPCQRPFLFFMKSVEYDKSGIWSNYTRHAVGKCFEESNSVKQLKKIIVFSRKLVLNVEELKAPRRQCCDVLPSSNETTIIHLRHCGTDELISMYQ 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01582 444 MobiDBLite consensus disorder prediction 1 36 - -
Aip03g01582 444 PANTHER FRINGE-RELATED 43 442 - -
Aip03g01582 444 Gene3D - 43 255 - -
Aip03g01582 444 PANTHER GLYCOSYLTRANSFERASE 43 442 - -
Aip03g01582 444 MobiDBLite consensus disorder prediction 1 18 - -
Aip03g01582 444 Pfam Protein of unknown function, DUF604 165 417 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01582 Aip-Chr3 17901970 17904867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01582 45 442 Glycosyltransferase AT4G15240 61.153 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01582 - - aip:107629947 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01582 03 17901970 17904867 Aip03g01582 03 17901970 17904867 ECH
Aip03g01582 03 17901970 17904867 Aip08g00786 08 7982638 7984483 PCT