Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00759 ATGGGTTCTGTAAACAAAGACCATGAACCACTCCTAGCTCCTCTTCATCACCACCGATCATTCACCGAAGCTGGTGCCGGAGATGGAGAACTTGAAAGGATACTCTCCGACACCTCCCAGCCACTCCTCAAGCGCCTTGGACCCGCCACGTGGATCGAGCTCAAGCTCCTCTTCTTCTTGGCTGCTCCGGCCGTCGTCGTCTACCTCATCAACTACCTGATGTCTATGTCCACGCAAATCTTCTCCGGCCACCTCGGCACCCTGGAGCTGGCTGCCGCTTCCCTTGGCAACACCGGCATCCAAATCTTCGCTTATGGACTGATGTTGGGAATGGGGAGTGCTGTTGAGACGCTATGCGGGCAAGCATTCGGTGCTCAGAGATTCGAGATGCTTGGGGTGTACCTTCAAAGATCAACGGTGCTGCTTTCACTAGCAGGTGTGGTGTTAACGGTGATCTACGTGTTCAGCGAACCAATCCTGGTGTTCCTGGGAGAATCACCAAGAATCGCATCAGCGGCAGCGCTCTTCGTATACGGACTAATCCCTCAAATCTTCGCGTACGCGGTGAACTTCCCGATTCAGAAGTTCCTTCAGGCGCAGAGCATAGTGGCGCCGAGCGCGTACATCTCGGCGGCGACGCTGGTTCTGCACCTGATAGTGAGCTGGGTGGTGGTGTACAAGGTGGGGCTGGGGCTTCTTGGAGCGTCGTTGGTTCTGAGCTTGTCGTGGTGGATAATTGTGATAGCGCAGTTTGTGTACATTGTGAAGAGTGAGAGGTGCAAGGACACGTGGCGGGGTTTCAGTACGCAAGCGTTCTCCGGGCTGCCGCAGTTCTTTAAGCTTTCGGCGGCTTCGGCGGTGATGCTCTGCCTTGAGACTTGGTATTTCCAGATCCTCGTCTTGCTTGCTGGCTTGCTCCCTCACCCTGAGCTCGCCCTCGATTCTCTCTCCATCTGTACCACAATATCCGGGTGGGTGTTCATGATATCTGTTGGATTCAACGCAGCTGCCAGCGTGAGGGTGAGCAATGAACTGGGAGCATCAAATCCAAGATCAGCATCATTCTCAGTGGTGGTTGTGACAATAATTTCATTCATAATATCAGTGATTGCGGGACTTGTGATACTTGCACTGAGGGATGTGATTAGCTATGCCTTCACTGAAGGGGAAGAGGTGGCTGCTGCTGTATCTGATCTTTGCCCTCTCCTCTCATTTGCCATTGTCTTGAATGGCATTCAGCCCGTACTCTCAGGGGTGGCTGTTGGATGTGGATGGCAAACATTTGTGGCATATGTCAATGTTGGTTGCTACTATGGAATTGGTATCCCATTGGGTGCCCTTCTCGGCTTCTATTTCAATTTTGGTGCTAAGGGAATATGGCTGGGAATGTTAGGTGGAACCGCAATGCAAACAATTATTTTGGTGTGGGTCACATTTCGAACCAATTGGCATAAAGAGGTAGAAGAAGCAGCTAAGAGGTTGAGCAAATGGGAGGTGGAGAAGAATAAGCCAATTCTTGACTGA 1524 0.5177 MGSVNKDHEPLLAPLHHHRSFTEAGAGDGELERILSDTSQPLLKRLGPATWIELKLLFFLAAPAVVVYLINYLMSMSTQIFSGHLGTLELAAASLGNTGIQIFAYGLMLGMGSAVETLCGQAFGAQRFEMLGVYLQRSTVLLSLAGVVLTVIYVFSEPILVFLGESPRIASAAALFVYGLIPQIFAYAVNFPIQKFLQAQSIVAPSAYISAATLVLHLIVSWVVVYKVGLGLLGASLVLSLSWWIIVIAQFVYIVKSERCKDTWRGFSTQAFSGLPQFFKLSAASAVMLCLETWYFQILVLLAGLLPHPELALDSLSICTTISGWVFMISVGFNAAASVRVSNELGASNPRSASFSVVVVTIISFIISVIAGLVILALRDVISYAFTEGEEVAAAVSDLCPLLSFAIVLNGIQPVLSGVAVGCGWQTFVAYVNVGCYYGIGIPLGALLGFYFNFGAKGIWLGMLGGTAMQTIILVWVTFRTNWHKEVEEAAKRLSKWEVEKNKPILD 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00759 507 PANTHER PROTEIN DETOXIFICATION 14 493 - -
Aip08g00759 507 CDD MATE_eukaryotic 53 489 IPR045069 GO:0042910|GO:1990961
Aip08g00759 507 TIGRFAM matE: MATE efflux family protein 63 460 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip08g00759 507 Pfam MatE 63 223 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip08g00759 507 Pfam MatE 285 446 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip08g00759 507 PANTHER MULTIDRUG RESISTANCE PROTEIN 14 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00759 Aip-Chr8 7722614 7727021 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00759 K03327 - gmx:100801718 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00759 08 7722614 7727021 Aip08g00759 08 7722614 7727021 ECH
Aip08g00759 08 7722614 7727021 Aip03g01549 03 17341840 17347517 PCT