Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00757 ATGTACATGACGGCGTATTCCTCTTCTTCCTCTATGCTCCTCAGAGCAACAAGGACTAAGCTCATCTCTTCCTCTCTTTCTAGAACCTTCCTTTCTTCTCCTCCTCCTCGCCCTACCGCTTCTTATCGATCCCTTGCCTTCTCATCCACCGCCGCCGCCGCCTTCCGTTCTTCCTCAGTCGCCGCCCGCTGGAGCCACTGGAGGTCTCCCCTCAGCCTCCGCTCTCAGATCAGGGCTGCCGCTCCCGTCCTCGAGCGGTTCCACCGCAAGCTAGCCACCGCGGCTGGTGAAAATCCTTTCAAGGGAAACCTTACCAGTCTTCCTAAGCCTGGAGGTGGCGAGTTCGGAAAGTACTACAGCCTTCCGTCTCTCAAGGACCCAAGGATTGATAGGTTACCATACTCTATCAGAATTCTGCTTGAATCTGCCCTCCGTAATTGTGACAATTTCCAAGTGAGTAAAGAAGATGTAGAGAAGATTATTGACTGGGAAAACACTGCTGTAAAGCAAGTTGAAATTCCTTTCAAACCTGCTCGAGTCCTTCTGCAGGATTTTACTGGTGTCCCAGCTGTTGTTGATCTGGCTTGCATGCGTGATGCTATGAATAGACTTGGCAGTGATTCTAACAAGATCAATCCTCTGGTTCCTGTTGATCTTGTCATCGATCATTCAGTTCAGGTTGATGTAACAAGGTCAGAGAATGCTGTACAAGCCAATATGGAGTTCGAGTTCAAGAGAAACAAGGAGAGATTTGCTTTTCTTAAATGGGGCTCAACTGCTTTCCATAATATGCTTGTTGTTCCACCTGGTTCTGGTATAGTACATCAAGTCAATCTCGAATATCTTGGGCGAGTTGTTTTCAACAATGAGGGTCTACTCTATCCCGACAGTGTGGTTGGGACTGATTCCCATACAACTATGATAGATGGACTTGGCGTTGCTGGATGGGGTGTTGGTGGCATTGAAGCAGAGGCAGCTATGCTTGGACAGCCTATGAGCATGGTATTACCTGGAGTGGTTGGGTTCAAGTTATCTGGAAAATTGCGCAATGGTGTTACAGCTACTGATTTGGTTCTTACCGTGACACAAATGCTTAGGAAACATGGTGTTGTTGGAAAATTCGTTGAATTTTATGGTGATGGTATGGGTGAGTTATCATTGGCTGACAGGGCCACTATTGCCAACATGTCTCCTGAATATGGAGCAACCATGGGTTTCTTCCCCGTAGATCATGTTACATTACAATACCTAAAGTTAACTGGAAGAAGTGACGAGACTGTGGCAATGATAGAGGCTTATCTCAGGGCAAACAAAATGTTTGTTGACTATAATGAGCCTCAACAAGATAGAGCTTATTCATCCTACCTTGAATTGAACCTTGATGATGTTGAACCTTGTATTTCTGGGCCAAAGAGACCTCATGATCGAGTGCCTTTGAAAGAAATGAAGTCCGATTGGCGTGCATGTCTTGATAACAAAGTGGGCTTTAAGGGATTTGCAATACCAAAAGAAGCACAAGGCAAAGTTGCGAAATTTAATTTCCATGGGCAGCCAGCTGAGCTGAAGCATGGCAGTGTTGTGATTGCTGCAATTACAAGCTGTACAAATACATCAAACCCAAGTGTTATGCTTGGGGCTGGTCTTGTAGCCAAAAAGGCCCACGATCTAGGTTTGCAGGTTAAGCCTTGGGTAAAAACTAGTCTTGCTCCTGGCTCTGGAGTTGTTACAAAATACCTACATCAGAGTGGTCTGCAAAAGTATCTAAATGAACAGGGTTTCAATATTGTTGGATTTGGCTGTACAACTTGTATTGGCAATTCAGGAGAGCTGGATGAATCAGTTGCTTCTGCTATCTCAGAAAATGACGTTGTAGCTGCTGCTGTATTGTCTGGGAACCGTAACTTTGAAGGCCGTGTACATCCTTTGACAAGAGCTAACTACCTTGCCTCCCCTCCTCTAGTTGTTGCTTATGCCCTTGCTGGCACGGTTGACATTGACTTTGAAAAGGAGCCAATAGGGACAGGGAAGGATGGCAAGAATGTCTACCTTAGGGATATTTGGCCATCCACTGAAGAAATTGCACAGGCTGTTCAATCTAGTGTGTTGCCTGACATGTTCCGAAGTACATATGAATCTATTACCAAGGGTAACCCTATGTGGAACCAACTACAAGTTCCTGTTGACAAGTTGTATTCGTGGGATCCCAACTCAACATATATTCACGAACCTCCGTACTTCAAGGGCATGACCATGGATCCTCCTGGAGCTCATGGTGTTAAAGATGCCTATTGCCTACTGAATTTTGGTGACAGTATAACTACTGATCACATTTCTCCTGCTGGAAGTATTCACAAAGACAGTCCTGCTGCAAAGTACCTTATGGAGCGGGGAGTGGATCGCAAGGACTTCAATTCTTATGGAAGTCGTCGTGGCAATGATGAGGTGATGGCAAGGGGAACTTTTGCCAACATCCGCATTGTTAACAAGCTCTTAAATGGTGAAGTTGGCCCAAAGACAGTTCACATTCCTACAGGAGAGAAGCTTTATGTGTTTGATGCAGCAATGAGATACAAGAATGAAGGACATGACACCATTGTGCTGGCTGGAGCTGAATATGGTAGTGGAAGTTCAAGGGATTGGGCTGCCAAGGGTCCCATGCTATTGGGAGTCAAAGCCGTGATAGCCAAGAGTTTTGAGAGAATTCATCGCAGTAACTTGGTAGGAATGGGTATTATTCCTCTCTGCTTCAAAGCTGGTGAGGATGCCGAGACTTTGGGGTTGACTGGCCATGAACGGTACACCATTGACCTTCCAAATAAAATCAGTGACATAAGGCCTGGTCAAGATGTAACTGTCACAACCAACACTGGAAAGTCTTTCACCTGCACAGTTCGTTTCGACACCGAGGTGGAACTGGCTTACTTTGACCACGGAGGCATCCTCCCATATGTCATCAGGAACCTCATTTCACAGTGA 2976 0.4577 MYMTAYSSSSSMLLRATRTKLISSSLSRTFLSSPPPRPTASYRSLAFSSTAAAAFRSSSVAARWSHWRSPLSLRSQIRAAAPVLERFHRKLATAAGENPFKGNLTSLPKPGGGEFGKYYSLPSLKDPRIDRLPYSIRILLESALRNCDNFQVSKEDVEKIIDWENTAVKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNRLGSDSNKINPLVPVDLVIDHSVQVDVTRSENAVQANMEFEFKRNKERFAFLKWGSTAFHNMLVVPPGSGIVHQVNLEYLGRVVFNNEGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRNGVTATDLVLTVTQMLRKHGVVGKFVEFYGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMIEAYLRANKMFVDYNEPQQDRAYSSYLELNLDDVEPCISGPKRPHDRVPLKEMKSDWRACLDNKVGFKGFAIPKEAQGKVAKFNFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKAHDLGLQVKPWVKTSLAPGSGVVTKYLHQSGLQKYLNEQGFNIVGFGCTTCIGNSGELDESVASAISENDVVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGTGKDGKNVYLRDIWPSTEEIAQAVQSSVLPDMFRSTYESITKGNPMWNQLQVPVDKLYSWDPNSTYIHEPPYFKGMTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKNEGHDTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDAETLGLTGHERYTIDLPNKISDIRPGQDVTVTTNTGKSFTCTVRFDTEVELAYFDHGGILPYVIRNLISQ 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00757 991 PRINTS Aconitase family signature 240 253 IPR001030 -
Aip08g00757 991 PRINTS Aconitase family signature 264 272 IPR001030 -
Aip08g00757 991 PRINTS Aconitase family signature 293 306 IPR001030 -
Aip08g00757 991 PRINTS Aconitase family signature 307 322 IPR001030 -
Aip08g00757 991 PRINTS Aconitase family signature 369 382 IPR001030 -
Aip08g00757 991 PRINTS Aconitase family signature 383 396 IPR001030 -
Aip08g00757 991 PRINTS Aconitase family signature 465 479 IPR001030 -
Aip08g00757 991 PRINTS Aconitase family signature 530 541 IPR001030 -
Aip08g00757 991 PRINTS Aconitase family signature 592 605 IPR001030 -
Aip08g00757 991 SUPERFAMILY Aconitase iron-sulfur domain 112 726 IPR036008 -
Aip08g00757 991 PANTHER ACONITATE HYDRATASE 52 991 - -
Aip08g00757 991 Gene3D Aconitase, domain 4 754 990 IPR015928 -
Aip08g00757 991 PANTHER ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER 52 991 IPR006249 -
Aip08g00757 991 Pfam Aconitase family (aconitate hydratase) 158 661 IPR001030 -
Aip08g00757 991 ProSitePatterns Aconitase family signature 1. 526 542 IPR018136 -
Aip08g00757 991 CDD AcnA_IRP 179 663 - -
Aip08g00757 991 Gene3D - 690 751 - -
Aip08g00757 991 CDD AcnA_IRP_Swivel 767 937 IPR044137 -
Aip08g00757 991 Pfam Aconitase C-terminal domain 790 918 IPR000573 -
Aip08g00757 991 SUPERFAMILY LeuD/IlvD-like 730 988 - -
Aip08g00757 991 ProSitePatterns Aconitase family signature 2. 592 605 IPR018136 -
Aip08g00757 991 Gene3D Aconitase, domain 3 97 465 IPR015931 -
Aip08g00757 991 Gene3D Aconitase, domain 3 466 689 IPR015931 -
Aip08g00757 991 TIGRFAM aconitase_1: aconitate hydratase 1 116 989 IPR006249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00757 Aip-Chr8 7678671 7686398 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00757 K01681 - gmx:100794803 1759.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00757 08 7678671 7686398 Aip08g00757 08 7678671 7686398 ECH
Aip08g00757 08 7678671 7686398 Aip03g01544 03 17229164 17238223 PCT