Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00749 ATGAATTTGAAGAGCAGAGGAGAGGTTCTTCTTCCTCATAGAAGCTTTTTGTCTCAGAGATGGATGATTTTTCTTTGTATTGGAAGCTTCTGTGCTGGGATGCTATTCACCAACAGGATGTGGACTATTCCCGAACCTAAAGGACTTGCAAGGACAACAGCTATGGAAGCTGAAAAATTGAATGTTGTTTCGGAGGGTTGCAATTCAAGAATTTTGCAAGAAAAGGAAGTGAAGCGCGAAACGAGAAGCATCTATAAGGAAGTTTTCAAAACACAAAATGCCATGCAAACATTGGACAAAACTATTTCAAACTTGGAGATGGAGTTAGCTGCTGCAAAGGCAGCTCAGGAGTCGATTCGCAATGGCGCTCCTCTATCAGAAGATATAAAGGCAGTTGAATCAACTCCTAGGAGAAGGTACCTCATGGTCATAGGAATCAACACTGCTTTTAGCAGCAGGAAAAGAAGAGACTCCGTCCGCCAAACCTGGATGCCTCAAGGTGAGAAAAGAAAGAAGCTAGAGGAAGAGAAAGGCATTATCATCAGATTTGTAATTGGTCATAGTGCTACATCAGGTGGTATATTAGACAGAGCTATAGAAGCAGAAGATAGGAAGCATGGAGATTTCTTGAGGCTGGATCATGTTGAAGGGTACCTTGAATTATCAGCAAAGACAAAGACCTACTTTGCAACTGCTGTTAACTTATGGGATGCTGATTTCTACATTAAAGTTGATGATGATGTTCATGTAAATATAGCAACACTTGGAGAGACTCTAGTTAGACACCGGTCGAAACCACGAGTATACATCGGATGCATGAAATCCGGGCCTGTTCTTTCCCAAAAAGGTGTAAGGTACCATGAACCAGAATACTGGAAATTCGGTGAGTCTGGAAACAAGTACTTCCGCCATGCCACAGGACAGTTGTATGCCATTTCAAAAGATCTTGCTACATATATTTCAATGAACCGGCATGTTCTTCACAAGTATGCCAATGAAGATGTCTCACTAGGCTCATGGTTTATTGGACTTGATGTGGATCATATTGATGATAGGAGACTCTGCTGTGGCACTCCACCAGATTGTGAATGGAAAGCTCAAGCAGGGAATGTGTGTGTAGCTTCATTTGATTGGACATGCAGTGGAATTTGCAGGTCTGCTGAGAGGATCAAAGAGGTTCATAGAAGATGTGGAGAAGGTGAAAAAGCTTTGTGGAATGCCTCTTTCTAA 1230 0.4203 MNLKSRGEVLLPHRSFLSQRWMIFLCIGSFCAGMLFTNRMWTIPEPKGLARTTAMEAEKLNVVSEGCNSRILQEKEVKRETRSIYKEVFKTQNAMQTLDKTISNLEMELAAAKAAQESIRNGAPLSEDIKAVESTPRRRYLMVIGINTAFSSRKRRDSVRQTWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVNLWDADFYIKVDDDVHVNIATLGETLVRHRSKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGESGNKYFRHATGQLYAISKDLATYISMNRHVLHKYANEDVSLGSWFIGLDVDHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWTCSGICRSAERIKEVHRRCGEGEKALWNASF 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00749 409 Pfam Domain of unknown function (DUF4094) 18 114 IPR025298 -
Aip08g00749 409 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 12 401 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aip08g00749 409 Coils Coil 95 115 - -
Aip08g00749 409 Gene3D - 135 353 - -
Aip08g00749 409 Pfam Galactosyltransferase 154 351 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aip08g00749 409 PANTHER HEXOSYLTRANSFERASE 12 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00749 Aip-Chr8 7546149 7550380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00749 1 409 Glycosyltransferase AT1G05170 78.484 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00749 K20855 - gmx:100793931 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00749 08 7546149 7550380 Aip08g00749 08 7546149 7550380 ECH
Aip08g00749 08 7546149 7550380 Aip03g01541 03 17142253 17146097 PCT