Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01541 ATGAGTTGGAAAAACAGGGGAGAGTTTCTTCCTTCTAGAAGCATTGTAACTCAAAGATGGGCACTTTTGCTTTGTGTCGCAAGTTTCTGTGCTGGGATGCTCTTCACAAACAGGATGTGGACTGTTCCTGAACCGAAAGGACTTGCGCGATCAACATCGACAGAATCCGAAAAATTGAATGTAGTTTCGGAGGGTTGCAATTCGAGAATTTTGCAAGAGACTCAAGATATTTATAAGGAAGCTTTCAAGGGTCATGGTTCCTTGCAAAATTTGGACAAGACTATTTCAAATTTGGAGATGGAATTGGCTGCTGCAAGGGCTGCTCAAGAATCAATAAGAAGTGGCGCTCCTGTTCCAGACGATATCAGGATGTCCGAATCATCCGGGAAGCGAAAGTACCTAATGGTTGTAGGTATTAACACTGCATTCAGCAGCCGGAAAAGAAGAGACTCGGTTCGTGCCACCTGGATGCCACAAGGTGAGAAAAGGAAAAGGCTGGAGGAGAAGGGCATTATTATGCGCTTTGTAATTGGTCACAGTGCTACATCAGGGGGTATCCTGGATAGAGCTATTGAAGCAGAGGACAGAAAGCATGGAGATTTCTTGAGGCTGAATCATGTGGAAGGATACCTTGAATTGTCGGCAAAGACAAAGACATACTTTTCGACTGCTGTTAACTTATGGGATGCTGACTTCTATGTCAAAGTCGATGATGATGTTCATGTAAATATAGCAACACTGGGAGATACTCTAGCTAGACACCGATCAAAACAGAGGGTATACATTGGATGCATGAAATCTGGACCTGTACTATCTCAAAAAGGAGTAAGGTACCACGAACCGGAATATTGGAAGTTCGGTGAGAATGGAAACAAGTACTTTCGTCACGCCACAGGGCAGTTGTATGCCATTTCAAACGATTTGGCTACTTACATTTCAATTAACCAGAATGTTCTTCACAAGTATGCCAATGAGGATGTGTCGCTTGGATCATGGTTTATTGGACTCGATGTGGAGCATATCGATGATCGAAGACTCTGCTGTGGCACTCCTCCAGACTGTGAATGGAAGGCTCAGGCAGGCAACATTTGCGTCGCTTCGTTCGATTGGAGCTGCAGTGGAATCTGCAGGTCTGCGGATCGGATGAAAGAGGTACATAGAAGGTGTGGAGAAGGTGAGAATGTTTTGTGGAGTGCCTCTTTCTAG 1206 0.4461 MSWKNRGEFLPSRSIVTQRWALLLCVASFCAGMLFTNRMWTVPEPKGLARSTSTESEKLNVVSEGCNSRILQETQDIYKEAFKGHGSLQNLDKTISNLEMELAAARAAQESIRSGAPVPDDIRMSESSGKRKYLMVVGINTAFSSRKRRDSVRATWMPQGEKRKRLEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFLRLNHVEGYLELSAKTKTYFSTAVNLWDADFYVKVDDDVHVNIATLGDTLARHRSKQRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISNDLATYISINQNVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSADRMKEVHRRCGEGENVLWSASF 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01541 401 Coils Coil 88 108 - -
Aip03g01541 401 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 7 393 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aip03g01541 401 Pfam Galactosyltransferase 147 343 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aip03g01541 401 Gene3D - 130 346 - -
Aip03g01541 401 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE 4-RELATED 7 393 - -
Aip03g01541 401 Pfam Domain of unknown function (DUF4094) 18 107 IPR025298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01541 Aip-Chr3 17142253 17146097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01541 1 401 Glycosyltransferase AT1G05170 76.961 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01541 K20855 - gmx:100776912 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01541 03 17142253 17146097 Aip03g01541 03 17142253 17146097 ECH
Aip08g00749 08 7546149 7550380 Aip03g01541 03 17142253 17146097 PCT