Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00719 ATGGATTACACCCATCTGCTTCTTCTTCTCTTCTTCTTATTCTTTGGTGTGGGATTCTCGGAGAACACGAATCCGAGGTTGCTGGCGTCACCATCATTATTATCAACGACTCAGATAAACTCGAACTCGATCCTTGTGGCTCTTCTGGACTCCCATTACACAGAGCTCGCGGAGCTCATAGAAAAAGCCATGCTCCTTCAAACACTCGAAGAAGCAGTAGCCACACACAACATCACAATCTTCGCACCCACCAACCAAGCCTTAGAATCAAACCTTGATTCTTTCTTCAAACGCTTCCTTCTCGAACCAGCTAATCTCCATTCCCTCCAAGCCCTCATTCTCTTCCACATCCTCCCAACCCGAATTTCATCCCAATATAGTTTCGGGTCGACCCGAATCAACACGCTATCGTCCGAACCCATTCGCCTCCAGACGAATTCCACCTCCAAAGAATGGACAGTCGATCGGGTCAAGATAACCCGGCCCGATGATGTTACCCGGCCCGATGGTATCATCCATGGGGTTAACGGCCTTCTCATTCCACGTTCCGTACAAGACGACTTCAACCGCCGCCGCAGTCTTCGCTCGATTGCCGCCGTGAAACCCGAGCCAGCTCCTGAAATCGATCCGAGAACCAACCGGGTTAAGAAGCTCGACCCGAAAGAAAAGCCTCCGGGCTCAAAACCCTCACTCCCGATCTATGAGGCGCTGGCACCGGGACCGTCACTAGCTCCGGCGTCGGCACCGGCACCTGGAGGCCACCACGGGCACTTCGATGGCGAGTCTCAGGTGAGGGACTTCATCCACACGCTAATCCACTACGGAGGGTACAACGAGATGGCGGACATTCTCGTAAACCTAACGTCACTGGCCACGGAGATGGGACGCTTGGTGTCAGAGGGTTACGTCCTCACCGTCCTTGCGCCGAACGACGAGGCTATGGCCAAGCTTACGACGGAGCAGCTCAGTGAACCGGGGGCACCGGAGCAGATAATGTACTACCATCTGATACCGGAGTACCAAACAGAAGAGAGCATGTACAATTCTGTTAGAAGGTTCGGGAAGGTTAGGTACGATACGCTGCGGTTGCCGCATAAGGTGGTGGCGATGGAGGCTGATGGTTCGGTGCGGTTCGGAAAAGGTGGCGGTTCGGCTTATTTGTTCGATCCTGATATATATACCGATGGAAGAATCTCTGTTCAGGGGATTGACGGGGTTTTGTTTCCGACGGAGGAAGGAGAGGAGACGGTGACGGGTCGGGTCAAGAACGGCAATCGGACGGGTCAACCCGTTAAGGTCGTTGTCAAGCATAGAAGAGGAAAATTGCTTGAAGCAGCATGCTGGATGCTTGGAACCGTCGGTCAACATTCTAGATTCGCCTCTTGTCAATGA 1392 0.5302 MDYTHLLLLLFFLFFGVGFSENTNPRLLASPSLLSTTQINSNSILVALLDSHYTELAELIEKAMLLQTLEEAVATHNITIFAPTNQALESNLDSFFKRFLLEPANLHSLQALILFHILPTRISSQYSFGSTRINTLSSEPIRLQTNSTSKEWTVDRVKITRPDDVTRPDGIIHGVNGLLIPRSVQDDFNRRRSLRSIAAVKPEPAPEIDPRTNRVKKLDPKEKPPGSKPSLPIYEALAPGPSLAPASAPAPGGHHGHFDGESQVRDFIHTLIHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTEQLSEPGAPEQIMYYHLIPEYQTEESMYNSVRRFGKVRYDTLRLPHKVVAMEADGSVRFGKGGGSAYLFDPDIYTDGRISVQGIDGVLFPTEEGEETVTGRVKNGNRTGQPVKVVVKHRRGKLLEAACWMLGTVGQHSRFASCQ 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00719 463 MobiDBLite consensus disorder prediction 207 224 - -
Aip08g00719 463 ProSiteProfiles FAS1/BIgH3 domain profile. 264 392 IPR000782 -
Aip08g00719 463 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 30 463 IPR044654 -
Aip08g00719 463 SMART fasc_3 305 410 IPR000782 -
Aip08g00719 463 SMART fasc_3 79 182 IPR000782 -
Aip08g00719 463 Pfam Fasciclin domain 299 409 IPR000782 -
Aip08g00719 463 Pfam Fasciclin domain 52 181 IPR000782 -
Aip08g00719 463 Gene3D FAS1 domain 44 182 IPR036378 -
Aip08g00719 463 MobiDBLite consensus disorder prediction 199 255 - -
Aip08g00719 463 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 30 463 - -
Aip08g00719 463 ProSiteProfiles FAS1/BIgH3 domain profile. 40 179 IPR000782 -
Aip08g00719 463 SUPERFAMILY FAS1 domain 42 182 IPR036378 -
Aip08g00719 463 SUPERFAMILY FAS1 domain 243 410 IPR036378 -
Aip08g00719 463 Gene3D FAS1 domain 283 410 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00719 Aip-Chr8 6939298 6942250 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00719 - - gmx:100782264 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00719 08 6939298 6942250 Aip03g01485 03 16329721 16332735 PCT