Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01485 ATGGATTGTTACATCCATGGCACCTTCTTCATCATCCTCATTTTCTTCTTCTCCAATACCCCAACTACATTTTCATCACCATCGCCATCATCATCTTCTTCTTCCTCACCAACGGCTCAGATCAATTCAAACTCCATCTTGGTGGCACTACTGGACTCACATTATACAGAACTGGCAGAATTGATTGAAAAAGCCATGCTTTTGCCGACACTCGAAGAAACCGTGGCAAACCACAACATCACCATTTTTGCCCCAAAGAACGAAGCTTTGGAGCGAAACCTTGACCCCGAATTCAAGCGCTTCCTCTTGGAACCCAGAAACCTCAAATCTCTTCAGACACTCATCATGTCACACATCGTCCCAACCCGAATCAATTCCGAACGCAAACCCGGGTCGACCCGACACAAAACCCTCGCCGCCGACAACCACCACATCCAAATCAGCGCCAATTCCACCGTTGAATTCACCGTCGACGGCGCACGGGTCACCCACCCGGAAACTCTAACCCGACCCGACGGAGTGATCCACGGAATCGACTCGCTCCTGATTCCACGCTCCGTCCAATCAGACTTCAGCAACCGCCGGAGCCTGCGCTCGATCGGCGCCGTGAAACCAGAAGGAGCACCGGAGGTCGATCCCCGAACTCACCGCCTGAAAAAACCAGCACCACCGTCAAAACCAGGTTCCTCACCGGCACTCCCGATCTACGACGCAATGGCACCAGGTCCGGCAATTGCTCCGGCGCCTGCACCAGGACCCGGAGGAAAACACCACCACTTCGACGGCGAAGCACAGGTGAAAGATTTCATCCAAACCCTAATCCAGTACGGCGGCTACAACGAAATGGCAGACATATTGGTAAACCTAACTTCTCTAGCAACCGAAATGGGTCGTTTGGTCTCAGAAGGTTACGTTCTAACGGTTTTGGCGCCAAACGACGAAGCGATGGCGAAATTGACTACGGAACAGTTGAGTGAACCAGGTGCACCGGAGCAGATTATGTATTACCATTTGATCCCTGAGTACCAAACGGAGGAATCGATGTACAATGCCGTTAGAAGGTTCGGGAAGGTTCGCTACGATACGCTTAGGGTTCCGCATAAGGTTGTGGCGGAGGAAGGGGATGGTTCTGTCAGGTTTGGCCGTGGCGATGGCGTTGCATTTTTGTTTGATCCTGATATCTATACGGACGGGAGGATCTCCGTTCAGGGGATTGATGCCGTGATGTTTCCGCCGGAGACGGCGGAGGAGAAGGCTGAGAAGGAGAATCAGGTTTTTAGGCGGGTCGCGAAAACGGGTCAGCCCGGGAAGGTAACGGTCAAGAAGCAGAGGAGAGGAAAATTGATGGAAACAGCATGCTGGATGCTTGGAACCTTTGGACAGCACTCTAGATTTGCCTCTTGCCAATAA 1410 0.5213 MDCYIHGTFFIILIFFFSNTPTTFSSPSPSSSSSSSPTAQINSNSILVALLDSHYTELAELIEKAMLLPTLEETVANHNITIFAPKNEALERNLDPEFKRFLLEPRNLKSLQTLIMSHIVPTRINSERKPGSTRHKTLAADNHHIQISANSTVEFTVDGARVTHPETLTRPDGVIHGIDSLLIPRSVQSDFSNRRSLRSIGAVKPEGAPEVDPRTHRLKKPAPPSKPGSSPALPIYDAMAPGPAIAPAPAPGPGGKHHHFDGEAQVKDFIQTLIQYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTEQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRVPHKVVAEEGDGSVRFGRGDGVAFLFDPDIYTDGRISVQGIDAVMFPPETAEEKAEKENQVFRRVAKTGQPGKVTVKKQRRGKLMETACWMLGTFGQHSRFASCQ 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01485 469 ProSiteProfiles FAS1/BIgH3 domain profile. 42 182 IPR000782 -
Aip03g01485 469 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 5 469 IPR044654 -
Aip03g01485 469 SUPERFAMILY FAS1 domain 244 413 IPR036378 -
Aip03g01485 469 SMART fasc_3 81 185 IPR000782 -
Aip03g01485 469 SMART fasc_3 307 412 IPR000782 -
Aip03g01485 469 Gene3D FAS1 domain 46 185 IPR036378 -
Aip03g01485 469 ProSiteProfiles FAS1/BIgH3 domain profile. 266 394 IPR000782 -
Aip03g01485 469 MobiDBLite consensus disorder prediction 198 260 - -
Aip03g01485 469 Pfam Fasciclin domain 54 184 IPR000782 -
Aip03g01485 469 Pfam Fasciclin domain 291 409 IPR000782 -
Aip03g01485 469 SUPERFAMILY FAS1 domain 43 185 IPR036378 -
Aip03g01485 469 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 5 469 - -
Aip03g01485 469 Gene3D FAS1 domain 285 412 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01485 Aip-Chr3 16329721 16332735 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01485 - - adu:107477699 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00719 08 6939298 6942250 Aip03g01485 03 16329721 16332735 PCT