Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00636 ATGGAGTTGGGAAGCATAACGCAGTTCCTTGAGGACAAGACCATTTTAATCACTGGTGCCACTGGCTTCCTTGCTAAACTTCTCGTGGAGAAGATATTGAGGGTTCAACCCAACATAAAAAGGTTATACCTTGTTGTGAGAGCATCAAATCCACATATAGCTGTCCAACGCTTGCATAATGAGGTCTTTGGGAAGAAATTGTTCAAAATGCAAAAAGAAAAGTGGGGTGAAAAATTCAGCTCCTTTTTATCCGAGAAAGTGGTGGCTGTTGCAGGTGATGTTTCTCTTCACAATTTTGGAATCAAAGACCAAACCCTCATTGAAGAGATGTTGGAAGAGATTGATATTATAGTGCACAGTGCCGCAACTACAAGACTTGATGAAAGATTTGATGTTGCAATGGATACAAACACAATAGGAGCTTATAATGCGATAAACTTTGCTAAAATATGTCACAAAATAGAAATTTTTCTTCACGTATCTACCGCTTATGTTTGTGGAGAAGCAAAAGGACAAATACCTGAGGAACCATTTCGTATGGGCCAAACATTAAAAAGCTCTTTCGAATTGGACATCAACTTAGAAAAGCAGTTGATTAAGAAAAAACTGAGTGAACTCCAATCACAAAATGCCAATCAAGAAACAATCACCTCAATAATGAAAGAATTTGGAACAATAAGGGCCAATTTGCATGGGTGGCCAAATACATATGTATTTACAAAAGCAATGGGAGAAATGGTTGTGACAAACATGAAGGGAAATATACCGTTGATCATCACACGTCCTACTGTTATAATCGGCACCCTTTCGGAACCTTTTCCGGGTTGGATTGAAGATGTTAGAACTATAGACTTTGTTTTTGTTGAGTATTTCAAAGGAGCAATAACCAGTTTTGTTGGTAATCCAAAGATAACTGTAGACCTGATACCAGTAGACATGGTGACAAACTCAATGATCATAGCGATGTTGGTTCATTCTAAGAATAATACTTCAAACAATTTGATCTACCATATTGGCACTTCGTTAAGAAATCCAATTAAACTTTCAGAAATTCAAGACATAATGCATCTTTATATTACAAAAAATCCATGGCTAAAAAATTATGGAAAGTCCGGGAGTTTGTATGAAAAATTTACATTCAACCCCAATTATACGGAAGATCTTGAATTTCCCCAATACAAGGGATCAAGGTTGAAGAGAATAATGAACATGTATCGTCCTTATCTTCACTTTGAGGGCATCTTTGATGATAAGAACACGGAGAAGCTACGAATGGCAATAAAAGGAGTTGGCAGTGTTGAGAGGAAATTTAACTTGGATCCCAAAAGTATTGATTGGAAGGAATATTTGGTGAATGTTCATTTTCCAGGTCTACTTAAGTATTCTATGCAACCTAAGATGTAA 1404 0.3668 MELGSITQFLEDKTILITGATGFLAKLLVEKILRVQPNIKRLYLVVRASNPHIAVQRLHNEVFGKKLFKMQKEKWGEKFSSFLSEKVVAVAGDVSLHNFGIKDQTLIEEMLEEIDIIVHSAATTRLDERFDVAMDTNTIGAYNAINFAKICHKIEIFLHVSTAYVCGEAKGQIPEEPFRMGQTLKSSFELDINLEKQLIKKKLSELQSQNANQETITSIMKEFGTIRANLHGWPNTYVFTKAMGEMVVTNMKGNIPLIITRPTVIIGTLSEPFPGWIEDVRTIDFVFVEYFKGAITSFVGNPKITVDLIPVDMVTNSMIIAMLVHSKNNTSNNLIYHIGTSLRNPIKLSEIQDIMHLYITKNPWLKNYGKSGSLYEKFTFNPNYTEDLEFPQYKGSRLKRIMNMYRPYLHFEGIFDDKNTEKLRMAIKGVGSVERKFNLDPKSIDWKEYLVNVHFPGLLKYSMQPKM 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00636 467 PANTHER MALE STERILITY PROTEIN 2-RELATED 7 464 IPR026055 GO:0080019
Aip08g00636 467 Pfam Male sterility protein 17 318 IPR013120 -
Aip08g00636 467 Gene3D - 7 383 - -
Aip08g00636 467 PANTHER FATTY ACYL-COA REDUCTASE 7 464 - -
Aip08g00636 467 CDD FAR_C 397 461 IPR033640 -
Aip08g00636 467 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 329 IPR036291 -
Aip08g00636 467 CDD FAR-N_SDR_e 13 363 - -
Aip08g00636 467 Pfam Male sterility protein 397 463 IPR033640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00636 Aip-Chr8 5840051 5893838 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00636 5 373 Acyl Lipid Metabolism Gene Families AT5G22500 50.541 1.16e-131 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00636 K13356 - gmx:100793736 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00636 08 5840051 5893838 Aip08g00636 08 5840051 5893838 ECH
Aip08g00636 08 5840051 5893838 Aip03g00232 03 2302403 2305923 PCT