Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00232 ATGGAGTTGGGAAGCATACTCCACTTCCTTCAGGATAAGACCATTCTCATCACTGGAGCCACTGGTTTCCTTGCCAAAATTCTGGTGGAGAAGATACTGAGGGTTCAACCAAATGTTAAGAAACTATTTCTTCTTTTAAGAGCTGCTGATGCTAAGTCTGCTACTCATCGCTTGCAAAATGAGATCATAGGCAAGGACTTGTTTAGATTGCTAAAAGAAAACTTAGGTCCAAACTTCAATTCCTTCATAGCACAAAAGTTGACACTCGTTCCAGGGGATATTTCTCGCCAGGATTTGGGTTTGGACTCTGATTCTATTCTCAAGCAACAAATTTACGACCAAACACATGTTATTATTAATTTAGCTGCAAATACCAACTTTGATGAAAGGTATGATATATCGTTGGGCCTAAATACCTTTGGAGTTAAGCACGTCATAAATTTTTCCAAAAAATGCACTAAACTCAAAGTGCTTGTGCATGTATCAACAGCTTATGTGTGTGGAGAGGGAGAAGGTCTAATAATGGAGAAGCCATATGAGATGGGTGTTTCACTAAATGGAGTTGTTGGATTAGACATCGATGCCGAACACAAACTCATACGTCACAAATTAGCTGACCTTCAACATCAGGGAGCCACAGAGAACGAAATTAAAATTGCCATGAAGGACTTGGGTATTACCAGGGCAAAGAAGTATGGATGGCCAAACACATATGTAATGACAAAAGCAATGGGAGAGATGATAGTAGAGGAGGAGAAAGTCAAAGGAGACTTGGGTGTTGATATTGTGATTGTTCGTCCTTCCATTGTTACCAGCACCTTCAAGGACCCTTTCCCCGGTTGGGCCGAGGGTGTTAGAACCATTGACAGTCTTGCTGTTGCTTATGGTAAAGGAAAACTCACTTGCTTCCTTGGAGATCTCAACGCCATTGTTGATGTCATACCAGCAGATATGGTGGTCAATGCAATACTAGTGGCCACGGCAGCTCATGCAACTCATCGTGCTAATGGTAATGGCATATATCATGTTACTTCCTCTGTTAGAAACCCACTTCGAAACTGGAATCTGCAAGACGTGGGGTACAGGTATTTCACGGCCAAACCATGGATCAACAAGGATGGTAAGGCAGTGAAGGTTGGCAAATGCAAAATTCTGAGCAGCATGGACAGCTTCAACAGACACATGTTCCTCCGCTACTTTCTTCTCTTAAAGGGACTGCAGCTGGCCAACACTGCCTTTTGCCACTTCTTCCAGGGAACCTATCTTGATCTCAACAGGAAGATTCAGATCGTCCTGCGCTTGGTTGACCTGTACAAGCCTTACTTGTTCTTCAAGGGAGTTTTTGATGATCTCAACACACACAACTTGAGACAAGCTGTCCTCATAGACACTCATCTCTTTTACTTCGATCCCAAGCTCATCAATTGGGATGATTACTTCCTCAACACTCATCTCCCTGGTGTCGTCAAATATATCTTCAATAATAAGAATTATTAA 1497 0.4228 MELGSILHFLQDKTILITGATGFLAKILVEKILRVQPNVKKLFLLLRAADAKSATHRLQNEIIGKDLFRLLKENLGPNFNSFIAQKLTLVPGDISRQDLGLDSDSILKQQIYDQTHVIINLAANTNFDERYDISLGLNTFGVKHVINFSKKCTKLKVLVHVSTAYVCGEGEGLIMEKPYEMGVSLNGVVGLDIDAEHKLIRHKLADLQHQGATENEIKIAMKDLGITRAKKYGWPNTYVMTKAMGEMIVEEEKVKGDLGVDIVIVRPSIVTSTFKDPFPGWAEGVRTIDSLAVAYGKGKLTCFLGDLNAIVDVIPADMVVNAILVATAAHATHRANGNGIYHVTSSVRNPLRNWNLQDVGYRYFTAKPWINKDGKAVKVGKCKILSSMDSFNRHMFLRYFLLLKGLQLANTAFCHFFQGTYLDLNRKIQIVLRLVDLYKPYLFFKGVFDDLNTHNLRQAVLIDTHLFYFDPKLINWDDYFLNTHLPGVVKYIFNNKNY 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00232 498 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 346 IPR036291 -
Aip03g00232 498 Pfam Male sterility protein 399 494 IPR033640 -
Aip03g00232 498 CDD FAR_C 397 493 IPR033640 -
Aip03g00232 498 Gene3D - 8 394 - -
Aip03g00232 498 PANTHER FATTY ACYL-COA REDUCTASE 2 493 - -
Aip03g00232 498 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 493 IPR026055 GO:0080019
Aip03g00232 498 CDD FAR-N_SDR_e 13 368 - -
Aip03g00232 498 Pfam Male sterility protein 17 323 IPR013120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00232 Aip-Chr3 2302403 2305923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00232 114 493 Acyl Lipid Metabolism Gene Families AT4G33790 58.747 2.39e-169 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00232 K13356 - gmx:100798338 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00232 03 2302403 2305923 Aip03g00232 03 2302403 2305923 ECH
Aip08g00636 08 5840051 5893838 Aip03g00232 03 2302403 2305923 PCT