Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00605 ATGGATATGGAGGGAGCAGAAGGAGTGAAGGTATTCATACCAGAGTCAATCCAGGGTGTGAGTAACCACTTGGCGGGGCAGATTCAGATGATATGGGAGGTTGTGAAGGCGCCATTGATAGTACCACTGTTGAAGCTTTCCGTCTACATTTCCTTAGCAATGGCGCTCATGCTTTTCATCGAGAGGCTCTACATGGGCATTGTCATCATCCTCGTGAAGCTCTTCTGGAAGAAACCGGAAAAACGCTACAATTATGAGCCCATCCAAGATGATGTCGAGCTTGGTAGCTCTAACTTCCCAGTCGTCCTCATCCAAATCCCAATGTTCAACGAAAGAGAGGTTTACAAGGTTTCGATTGGAGCAGCTTGTAATCTTTCTTGGCCTGCTGACCGTCTCGTGATCCAAGTCCTGGATGATTCTACCGACCCCGTGGTTAAGCAAATGGTGGAAATGGAATGTCAGAGATGGGCGAGCAAAGGGATAAACATAACGTACCAAATCAGAGAGAACAGAACGGGGTACAAAGCGGGTGCACTCAAAGAAGGTCTAAAACGTAGCTACGTCAAGCACTGTGAGTACGTGGCAATCTTCGATGCTGATTTCAGGCCTGAGCCTGATTTCCTCCGTAGAGCCGTTCCTTTCTTGATTGGCAACCCTGACATCGCACTTGTTCAAGCTCGCTGGAGATTTGTGAATGCTGACGAGTGTTTGCTGACAAGAATGCAAGAGATGTCCCTTGATTACCATTTCACAGTGGAGCAAGAAGTTGGATCAGCCACTCATGCTTTCTTTGGTTTCAATGGGACAGCAGGTATTTGGAGAATTGGTGCAATCAATGAAGCAGGAGGGTGGAAAGACAGAACAACCGTGGAGGACATGGATCTTGCTGTTCGTGCTAGTCTTAGGGGATGGAAATTTGTCTACCTTGGAGACCTCCAGGCCAAAAGTGAGCTTCCAAGTACTCTGAGGGCCTTCAGGTTCCAGCAACACAGATGGTCTTGTGGTCCTGCTAATCTGTTCCGCAAAATGGTGATGGAGATTGTAAGGAACAAGAAAGTGAGATTTTGGAAGAAAGTGTACGTTATATACAGCTTCTTCTTTGTTAGAAAGATCATAGCTCACATGGTCACATTCTTCTTCTACTGTGTTGTGCTTCCACTCACAATCTTGGTCCCTGAGGTTCATGTTCCAATCTGGGGTGCTGTTTATATCCCTTCCATCATCACCATCCTCAATTCAGTTGGAACACCAAGGTCAATTCACCTGCTGTTCTACTGGATCCTTTTTGAGAATGTGATGTCATTGCATCGAACAAAAGCAACATTCATAGGTCTGTTAGAAGCTGGGAGAGCCAATGAGTGGGTTGTTACTGAGAAACTTGGTGATTCTGTCAATAACAAGAACAAAGATGCTTCCAAGAACAAAGCCAACAATAATGCCATCAAAGCACCAGTCAAGAAACCAAGATCCAGGTTTTTCGAAAGAGTTAACACGTTGGAGCTTGGATTTGCTGCATTCCTCTTCTTCTGTGGATGCTATGACTTTGTGCATGGAAAGAACAACTACTTTATTTACCTATTCCTTCAGACCATAACCTTCTCAATTGTTGGATTTGGCTACGTTGGTACCATTGTCTAA 1638 0.4512 MDMEGAEGVKVFIPESIQGVSNHLAGQIQMIWEVVKAPLIVPLLKLSVYISLAMALMLFIERLYMGIVIILVKLFWKKPEKRYNYEPIQDDVELGSSNFPVVLIQIPMFNEREVYKVSIGAACNLSWPADRLVIQVLDDSTDPVVKQMVEMECQRWASKGINITYQIRENRTGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDFLRRAVPFLIGNPDIALVQARWRFVNADECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGIWRIGAINEAGGWKDRTTVEDMDLAVRASLRGWKFVYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVRFWKKVYVIYSFFFVRKIIAHMVTFFFYCVVLPLTILVPEVHVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEAGRANEWVVTEKLGDSVNNKNKDASKNKANNNAIKAPVKKPRSRFFERVNTLELGFAAFLFFCGCYDFVHGKNNYFIYLFLQTITFSIVGFGYVGTIV 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00605 545 Pfam Glycosyl transferase family group 2 193 402 IPR001173 -
Aip08g00605 545 SUPERFAMILY Nucleotide-diphospho-sugar transferases 97 381 IPR029044 -
Aip08g00605 545 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 91 319 IPR029044 -
Aip08g00605 545 PANTHER - 10 545 - -
Aip08g00605 545 CDD CESA_CaSu_A2 100 336 - -
Aip08g00605 545 PANTHER BNAC09G36340D PROTEIN 10 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00605 Aip-Chr8 5365079 5370058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00605 10 545 Miscellaneous Gene Families AT5G22740 82.123 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00605 K13680 - gmx:100802752 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00605 08 5365079 5370058 Aip08g00605 08 5365079 5370058 ECH
Aip08g00605 08 5365079 5370058 Aip03g00254 03 2482662 2486559 ECH