Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00593 ATGGCTTCCTCGAGAGTGGATCTAGATGGGAACCCAATAAAGCCCATAACGATTTGCATGATCGGTGCCGGAGGTTTCATAGGCTCCCACCTCTGCGAGAAGCTCATGACGGAGACGCCGCACACGGTGCTCGCTTTGGACGTTTACAACGACAAGATCAAGCACCTCTTGGAGCCTGAAACGAATCCATGGCATGGTAGAATCAACTTCCACCGCCTCAACATCAAGCACGATTCGAGGCTCGAAGGTCTTATCAAAATGGCAGATCTGACGATTAATTTGGCTGCTATATGCACTCCTGCGGATTACAACACGCGCCCTTTGGACACCATTTATAGCAACTTCATCGATGCACTTCCAGTGGTGAAGTACTGTTCTGAAAACAACAAGCGTCTCATTCATTTCTCGACTTGTGAAGTGTATGGGAAAACCATTGGGAGCTTTCTCCCTAAGGATAGCCCGCTTCGTAAGGATCCTGCATACTATGTACTTAAAGAAGATGAGTCTCCATGCATTTTTGGTTCCATTGAAAAGCAGAGATGGTCTTATGCCTGTGCAAAGCAGTTGATTGAGAGGCTGATTTATGCTGAGGGTGCTGAAAATGGTTTGGAGTTCACAATTGTGCGACCCTTTAATTGGATTGGACCACGAATGGATTTCATTCCCGGCATTGATGGTCCAAGTGAAGGTGTTCCTCGTGTTCTGGCATGCTTTAGCAATAATCTCCTGAGGAAAGAGCCCCTAAAGCTTGTGGATGGTGGTCAATCCCAGAGGACTTTTGTTTATATTAAGGATGCTATTGAAGCTGTCTTGTTGATGATTGAAAATCCTGCTAGGGCTAATGGACACATCTTTAATGTTGGTAACCCAAACAATGAGGTTACAGTTAGGCAGCTTGGGGAAATGATGGTTAAGGTTAAAGGACTAAGTTTCATTATTCAGTACTATTATTAG 954 0.4497 MASSRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMTETPHTVLALDVYNDKIKHLLEPETNPWHGRINFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRKDPAYYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRKEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLGEMMVKVKGLSFIIQYYY 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00593 317 PANTHER - 4 306 - -
Aip08g00593 317 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 4 306 - -
Aip08g00593 317 Pfam NAD dependent epimerase/dehydratase family 18 288 IPR001509 -
Aip08g00593 317 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 313 IPR036291 -
Aip08g00593 317 Gene3D - 16 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00593 Aip-Chr8 5235508 5238687 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00593 K12449 - gmx:100792879 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00593 08 5235508 5238687 Aip08g00593 08 5235508 5238687 ECH
Aip08g00593 08 5235508 5238687 Aip03g00260 03 2578045 2581245 PCT