Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00571 ATGGTGGAACAACAGCACAAAAACCAGAGACCCCCAAAGAGTAGTAGTAGTAGTAGGGGCTTGTATGTGAAGATGAACCTCTTTCATCACAAACATGGCTACAACTACAACAAGCTCAATCAGCATTATCAACAGCAACAACAAGATAGAAGCTGCTTCTGCAGATACTACAAATGGCTTCTATGGCTCTCTCTCTCCCTCTACTTCTTCACCTCTTTTCTCATCACCAATAACAACAACACCACCGCCCAAAAGACAGAACCAACCGAGAACTTCGTTAAATCCCATGTTGTACCTCGTACACTGTTAGAATCCAGCAACATTGCAAGCAAACTCAAGAATATGAAGGTGTTCATCTACGAGCTCCCATCAAAGTACAACACAGATTGGTTAACCAACGAGAGGTGCAGCACTCACTTGTTTGCGTCGGAAGTCGCCATTCACAGAGCACTCTTGACCAGCGACCTTCGAACCTTTGACCCCAACCAAGCTGACTTCTTCTTCGTCCCGGTCTACGTCTCCTGCAACTTCAGCACCGTCAATGGCTTCCCTTCAATCTCACACGCCCGCAACCTCATTTCCTCCGCGGTGCAACTCATCTCCACACACCACCCTTTCTGGAACCGCACCTCCGGATCCGACCACGTCTTCGTCGCTTCCCATGATTTTGGCGCTTGTTTCCACAATCTCGAAGATGTGGCCATGCAGCATGGGATACTGGAAATAATGAAGAACTCAATAGTGTTGCAGACGTTCGGCGTTGAGTACCAGCACCCGTGCCAACAAGTTGAGAATGTAGTCATACCGCCTTACGTGTCGCCGGAAAGTGTACGGAAGACTCTTGCTAAGAATTCTCCGGCGAACGGACGCAGAGACATTTTTGCGTTCTTCCGTGGGAAAATGGAGGTTCATCCTAAGAACATAAGCGGAAGGTTTTACAGCAAGAGAGTGAGGACGGTGATATGGCGTAAATTCAGCGGTGACCGGAGATTTTACCTCAAGAGGCATAGGTTTGCCGGTTACCAGTCAGAGATAGCGAGGTCTGTTTTCTGTTTGTGTCCACTTGGGTGGGCCCCCTGGAGTCCCAGACTGGTTGAGTCTGTTTTATTAGGATGCGTGCCCGTAATTATCTCAGACGGTATTCGGTTACCGTTTTCGTCTGCCGTGAGGTGGCCGGATATTTCCGTTAGGGTGGCCGAGAGGGACGTCGGGAAGCTTGGGAGGATCCTTGAGCGCGTGGCAGCGACGAACCTCACGGCGATTCAGAGGAACCTGTGGGACCCGAGAACGAGGCGGGCCCTGATGTTCAACGAGGAGGTGCAGGAAGGGGATGCCACGTGGCAGACTCTGGTTAGTCTGAGTGAGAAGCTTGGTAGGTCTTACGGTAGGTCTACAGTTTCTGGCGAATTGGAGAGTGACACGTAA 1425 0.5032 MVEQQHKNQRPPKSSSSSRGLYVKMNLFHHKHGYNYNKLNQHYQQQQQDRSCFCRYYKWLLWLSLSLYFFTSFLITNNNNTTAQKTEPTENFVKSHVVPRTLLESSNIASKLKNMKVFIYELPSKYNTDWLTNERCSTHLFASEVAIHRALLTSDLRTFDPNQADFFFVPVYVSCNFSTVNGFPSISHARNLISSAVQLISTHHPFWNRTSGSDHVFVASHDFGACFHNLEDVAMQHGILEIMKNSIVLQTFGVEYQHPCQQVENVVIPPYVSPESVRKTLAKNSPANGRRDIFAFFRGKMEVHPKNISGRFYSKRVRTVIWRKFSGDRRFYLKRHRFAGYQSEIARSVFCLCPLGWAPWSPRLVESVLLGCVPVIISDGIRLPFSSAVRWPDISVRVAERDVGKLGRILERVAATNLTAIQRNLWDPRTRRALMFNEEVQEGDATWQTLVSLSEKLGRSYGRSTVSGELESDT 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00571 474 Pfam Exostosin family 113 412 IPR040911 -
Aip08g00571 474 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 45 466 IPR004263 GO:0006486|GO:0016757
Aip08g00571 474 PANTHER GLUCURONOSYLTRANSFERASE, PUTATIVE-RELATED 45 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00571 Aip-Chr8 4921000 4923619 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00571 K20889 - gmx:100797984 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00571 08 4921000 4923619 Aip08g00571 08 4921000 4923619 ECH
Aip08g00571 08 4921000 4923619 Aip03g00290 03 2828658 2830270 PCT