Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00290 ATGAAGCTCCAAAGTCACAACCACAACAACCATGGTGCCAACAAAACCACTTCCTTCTACAAATGGCTCCTCTGCCTCTCTCTTTCTCTCTACTTCTCCACCTCCTACCTCATCACCACTTCACCACCACCACCCTCACCATCACAACCACCACACAACACAAAACCCTCCCCCCAGAGAACTCTCTTTGAAACTCCATGGTCGTCGTCCCTCAAGAATCTCAGGATCTTTGTTTATGATCTTCCTTCAAAGTTCAACACAGATTGGTTGACCAACCAAAGGTGCAGCACGCACTTGTTTGCATCCGAGGTTGCAATCCACCGTGCCTTGTTGACCAGCCACGTCAGAACCTTTGACCCTTACGACGCTGACTTCTTCTTCGTCCCCGTCTACGTTTCCTGCAACTTCAGCACCGTTAATGGTTTCCCCGCCATAGGCCACGCCCGCTCCCTTATCTCCTCCGCTGTTAAACTCATCTCCGATCGCTTCCCTTTCTGGAACCGCAGCCATGGGCGTGACCATGTCTTCGTCGCCTCCCACGATTTCGGCTCCTGCTTCCACACCCTCGAGGACGTGGCGATTGCGGATGGCGTGCCGGAGATAATGAGGAAATCGATCGTGTTGCAGACGTTTGGCGTGACATATAAGCACCCGTGTCAGGAGGTTGAGAACGTCGTCATACCGCCGTACGTGTCGCCGGAGAATTTGCGGACCACCGTCGACAAGCTCCCGGCGAATTGGCAGCGAGATATTTGGGTGTTCTTCCGCGGCAAAATGGAGGTCCATCCTAAGAATGTTAGCGGAAGATATTACAGCAAGAAAGTGCGAACGATGATATGGCGAAAGTTCAGCGGTGACCGGAGGTTTTACCTTCAGAGGCATAGATTTGCCGGTTACCAGTCAGAAATCGCGCGTTCGGTTTTCTGTTTATGTCCGTTGGGGTGGGCCCCATGGAGTCCAAGACTGGTAGAGTCCGTTGCCTTGGGCTGCGTGCCGGTCATCATAGCCGACGGCATCCGATTACCGTTCTCATCCGCCGTGAGATGGCCGGAGATATCGCTGACGGTGGCGGAGCGCGACGTCGGGAAACTGGCGGAGATACTTGAGCGCGTGGCGGCGACGAACCTCAGCGATATTCAGAGGAATCTGTGGGACCCAATGACTAAGAAGGCACTTTTATTCAACGAGAGGGTCCATGAAGGCGATGCCACGTGGCAGGTTTTGCGTTCATTGAGCGAGAAGCTTGATAGGTCCTTAAGAAGCTCCAGAGTTTCCCGCCAATTAGATTTTGCCACGTAG 1299 0.5335 MKLQSHNHNNHGANKTTSFYKWLLCLSLSLYFSTSYLITTSPPPPSPSQPPHNTKPSPQRTLFETPWSSSLKNLRIFVYDLPSKFNTDWLTNQRCSTHLFASEVAIHRALLTSHVRTFDPYDADFFFVPVYVSCNFSTVNGFPAIGHARSLISSAVKLISDRFPFWNRSHGRDHVFVASHDFGSCFHTLEDVAIADGVPEIMRKSIVLQTFGVTYKHPCQEVENVVIPPYVSPENLRTTVDKLPANWQRDIWVFFRGKMEVHPKNVSGRYYSKKVRTMIWRKFSGDRRFYLQRHRFAGYQSEIARSVFCLCPLGWAPWSPRLVESVALGCVPVIIADGIRLPFSSAVRWPEISLTVAERDVGKLAEILERVAATNLSDIQRNLWDPMTKKALLFNERVHEGDATWQVLRSLSEKLDRSLRSSRVSRQLDFAT 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00290 432 Pfam Exostosin family 72 370 IPR040911 -
Aip03g00290 432 PANTHER GLUCURONOSYLTRANSFERASE, PUTATIVE-RELATED 15 422 - -
Aip03g00290 432 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 15 422 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00290 Aip-Chr3 2828658 2830270 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00290 K20889 - gmx:100782077 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00290 03 2828658 2830270 Aip03g00290 03 2828658 2830270 ECH
Aip08g00571 08 4921000 4923619 Aip03g00290 03 2828658 2830270 PCT