Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00409 ATGAGTAACCTCCCGGTTACTGACCCGCCTGAGACCAAATCTACGGGCTTTTTCGCTTCCATGTCCTCCATGTTCGGCAGCGCCAGGCGGGAATCGAGTAGATCGCACTCACCGGAACGCCTCAATTTGGAAGGATTAGAAGTCATAAATCCCGAGGGAGGAAAAGATGATGCAGCAGAGGAAGCTAAAAAAGGAAGATTTAAACCGGAGGAAAGAGATAGTTTCTTCAAAATGATGAAAAATTACATTGGGGCAGATGTGACATCACTGGTAACGCTACCAGTTACTATCTTTGAACCTATGACTATGCTTCAGAAAATGGCCGAGTTGATGGAGTACTCCCACTTGCTTGATAAAGCAGATGAGTGTGAGGATCCATACATGCGGCTTGTGTATGCATCATCATGGGCTGTATCTGTGTACTATGCATACCAAAGAACATGGAAGCCTTTTAATCCAATCCTTGGAGAGACCTATGAAATGGTTAACCATGGTGGAATCACTTTTCTTTCAGAACAGGTTAGTCATCATCCCCCAATGAGTGCTGGGCATGCTGAGAATGAGCATTTCACATATGATATCACTTCGAAGTTGAAAACCAAATTCTTGGGAAATTCTCTGGATGTTTATCCTCTTGGAAGGACACGTGTAACTCTCAAGAGGGATGGTGTAATCTTAGATTTGGTGCCACCTCCTACAAAGGTTAATAACCTGATATTTGGACGGACATGGATTGAGTCACCTGGGGAAATGATAATGACAAATTTGACAACTGGGGAAAAAGTTGTACTTTACTTTCAACCATGTGGATGGTTTGGGGCTGGTCGCTATGAGGTAGATGGGTATGTTTATAATGCTGCAGAGGAGCCTGAAATTTTGATAACTGGGAAATGGAATGAGTCAATGCAATATCAACCTTGTGATTTGGAAGGAGAGCCTCGTCCAGGTACAGAATTGAAAGAGGTGTGGCATGTTGCTGATGTTCCAGAGGATGACAAATTTGATTATACATATTTTGCGCACAAATTAAACAGTTTCGACACAGCTCCAAGAAAACTCTTGCCATCGGACTCCCGTTTACGCCCAGATAGATATGCACTTGAGATGGGTAACATAACCAAATCTGGTGCTGAAAAGAGCAGGTTGGAGGAGAGGCAGCGTGCTGAAAAGAAAATAAGGGAGGCCAAAGGGGAAACCTTCAAAACAAAGTGGTTTGATATAACTGAAGAAGTGGCAACCACTCCTTGGGGTGACTTGGAAATCTGTAAATACAATGGTAAATACACTCAGCATAGGGCTGCTATAGATAGCTCAGCCACTGATGAGGTTGATAATAAATCCGTTGAATTCAACCCATGGCAGTATCCACCACCATCATAA 1380 0.4326 MSNLPVTDPPETKSTGFFASMSSMFGSARRESSRSHSPERLNLEGLEVINPEGGKDDAAEEAKKGRFKPEERDSFFKMMKNYIGADVTSLVTLPVTIFEPMTMLQKMAELMEYSHLLDKADECEDPYMRLVYASSWAVSVYYAYQRTWKPFNPILGETYEMVNHGGITFLSEQVSHHPPMSAGHAENEHFTYDITSKLKTKFLGNSLDVYPLGRTRVTLKRDGVILDLVPPPTKVNNLIFGRTWIESPGEMIMTNLTTGEKVVLYFQPCGWFGAGRYEVDGYVYNAAEEPEILITGKWNESMQYQPCDLEGEPRPGTELKEVWHVADVPEDDKFDYTYFAHKLNSFDTAPRKLLPSDSRLRPDRYALEMGNITKSGAEKSRLEERQRAEKKIREAKGETFKTKWFDITEEVATTPWGDLEICKYNGKYTQHRAAIDSSATDEVDNKSVEFNPWQYPPPS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00409 459 MobiDBLite consensus disorder prediction 50 66 - -
Aip08g00409 459 Gene3D - 156 330 - -
Aip08g00409 459 MobiDBLite consensus disorder prediction 28 66 - -
Aip08g00409 459 ProSitePatterns Oxysterol-binding protein family signature. 172 183 IPR018494 -
Aip08g00409 459 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 9 457 IPR000648 GO:0008289
Aip08g00409 459 Pfam Oxysterol-binding protein 74 432 IPR000648 GO:0008289
Aip08g00409 459 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3C-LIKE ISOFORM X1 9 457 - -
Aip08g00409 459 Coils Coil 378 398 - -
Aip08g00409 459 MobiDBLite consensus disorder prediction 436 459 - -
Aip08g00409 459 SUPERFAMILY Oxysterol-binding protein-like 69 442 IPR037239 -
Aip08g00409 459 Gene3D - 364 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00409 Aip-Chr8 3146898 3150560 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00409 - - gmx:100779808 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00409 08 3146898 3150560 Aip08g00409 08 3146898 3150560 ECH
Aip08g00409 08 3146898 3150560 Aip03g00487 03 4718954 4722658 PCT