Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00487 ATGGGTAGCCCGAAGAAGAACGAAAGCAAGGGCTTTTTTGCCTCCGTATCTTCTAGCTTCTCCGTTTTCAGCAACGCGATGCACCGATCCGTCAATGGACTTTTGGGATATGAAGGTGTAGAAGTCATAAATCCAGAGGGAGGTAAAGAAGATGCAGAGGAAGAAGCTCAGAGGGGAAGATGGAAGCAGGAGGATAGAGATAGTTATTGGAAGATGATGCAGAAATATATTGGCGCAGATGTAACATCAATGGTGACACTACCAGTTATTATCTTTGAGCCAATGACTATGCTTCAGAAAATGGCAGAGTTGATGGAGTACTCCTACTTGTTGGATCGGGCTGATGAATCAGAGGATCCATACATGCGGTTGGTATATGCATCATCATGGGCTATATCTGTGTACTTTGCATACCAGCGAACATGGAAGCCTTTCAATCCAATCCTTGGAGAGACTTATGAATTGGTTAACCATGGTGGAATTACATTTCTTGCAGAACAGGTGAGTCATCATCCCCCAATGAGTGCTGGGCATGCTGAGAATGACCATTTTGCATATGATGTGACTTCAAAGTTAAAAACAAAGTTTTTGGGAAATTCTGTTGATGTTTATCCTGTTGGAAGAACACGAGTGACCCTCAAGAGAGATGGTGTTGTCTTAGATTTGGTGCCTCCACCTACAAAGGTTAACAACTTGATATTTGGCCGGACTTGGGTTGATTCACCCGGGGAAATGATAATGACAAATTTAACAACGGGAGACAAAGCTGTACTGTACTTTCAACCCTGTGGTTGGTTTGGTGCTGGTCGCTATGAAATTGATGGATATATTTACAATTCTTCTGAGGAGCCTAAAATATTAATGACTGGGAAATGGAATGAATCACTGAGTTACCAACCTTGTGACCCAGAAGGAGAGCCTCTACCAAACACGGAAATGAAAGAGGTTTGGCATGTTGCTGATGTTCCACCAAATGATAAATTCCAGTACACACATTTTGCCCACAAAATAAACAGCTTTGACACCGCCCCCAAAAAGTTGCTGGCATCAGACTCTCGTTTACGCCCAGATAGATATGCACTTGAGTTGGGTGATCTGTCGAAAGCTGGAACAGAGAAAACCAGCTTGGAGGAGAGGCAGCGAGCTGAAAAGAGAACCCGAGAAGCAAACGGGCATAACTTCACACCAAGATGGTTTGATCTAACTGAAGAGGTGACAACAACTCCATGGGGAGAATTGGAAATCTACCAGTATAATGGTAAATATTCCGAACACCGGGCTTCTATCGATAACTCTGGCAGCATTGATAATGTTGATGTTAAATCAACTGAATTCAATCCATGGCAATATGGTAACTTGTCCACAGAGTGA 1371 0.4303 MGSPKKNESKGFFASVSSSFSVFSNAMHRSVNGLLGYEGVEVINPEGGKEDAEEEAQRGRWKQEDRDSYWKMMQKYIGADVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDRADESEDPYMRLVYASSWAISVYFAYQRTWKPFNPILGETYELVNHGGITFLAEQVSHHPPMSAGHAENDHFAYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVVLDLVPPPTKVNNLIFGRTWVDSPGEMIMTNLTTGDKAVLYFQPCGWFGAGRYEIDGYIYNSSEEPKILMTGKWNESLSYQPCDPEGEPLPNTEMKEVWHVADVPPNDKFQYTHFAHKINSFDTAPKKLLASDSRLRPDRYALELGDLSKAGTEKTSLEERQRAEKRTREANGHNFTPRWFDLTEEVTTTPWGELEIYQYNGKYSEHRASIDNSGSIDNVDVKSTEFNPWQYGNLSTE 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00487 456 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3C-LIKE ISOFORM X1 1 453 - -
Aip03g00487 456 Gene3D - 151 328 - -
Aip03g00487 456 SUPERFAMILY Oxysterol-binding protein-like 63 438 IPR037239 -
Aip03g00487 456 MobiDBLite consensus disorder prediction 371 390 - -
Aip03g00487 456 ProSitePatterns Oxysterol-binding protein family signature. 166 177 IPR018494 -
Aip03g00487 456 Gene3D - 358 448 - -
Aip03g00487 456 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 453 IPR000648 GO:0008289
Aip03g00487 456 Pfam Oxysterol-binding protein 68 426 IPR000648 GO:0008289
Aip03g00487 456 MobiDBLite consensus disorder prediction 370 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00487 Aip-Chr3 4718954 4722658 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00487 - - gmx:100779808 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00487 03 4718954 4722658 Aip03g00487 03 4718954 4722658 ECH
Aip08g00409 08 3146898 3150560 Aip03g00487 03 4718954 4722658 PCT