Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00402 ATGGAAAACGGGAATCAGTTCCAGGAAGTTTCAAAGGCCAAATACGATTGTCTTTTGTTTGATCTTGATGATACCCTTTATCCTTTTAGTTCTGGATTATCAGCGCATGTGACAAAAAATATTCAAGATTACATGCTTCAAACACTTGACATAGAGGATGCTAAAGTTCCTGAATTATGCTATTCACTATACAAGGTTTATGGGACAACAATGGCTGGTCTCAGGGCAATTGGATATGACTTTGACTATGATGACTTTCATGGCTTTGTTCATGGGAGATTGCCATATAATTTGCTGAAACCTGACCCTATTATTAAGGGAATTTTGCTAAGCTTGCCTATGAGAAAAGTTGTTTTCACAAACTCAGATGAGGCACATGCAGGTAGAGTACTTCAAAGGCTTGGATTGGAGGATTGCTTTGAAAGGATCATAAGCTTTGAAACATTAAACCCATTCAACAAGTTGAATGATCCTGAGAACAAACTTGGCAATGGAAGTAGAGCAATTAGCACAGGAATATTTGATTTTTATGAGTACTTGAGTAAGCCTGATTCTGATATTGTGCTTCCAAGGACCCCAGTAGTCTGCAAACCTTTTCAAGATTCATTTGAAAAGGTTTTTAGTTTGGCAAGCATTGACCCTCAAAGAACATTGTTCTTTGATGACAGTATCCGCAATTTAGCCACTGGCAAATCATTGGGCCTTCACACTGTAGTGGTGGGTACTTCTGTTAGAACCGCAGGAGTGGATCATGCATTAGAGAGTATACATAATATGAAGGAAGCATTTCCAGAACTGTGGGAAGCTGCTGAGAAATCTGAAGGGGTCAAGTATTCTAGGAAGGTTTCAATTGAAACATCTGTCATAGCTTAA 873 0.3872 MENGNQFQEVSKAKYDCLLFDLDDTLYPFSSGLSAHVTKNIQDYMLQTLDIEDAKVPELCYSLYKVYGTTMAGLRAIGYDFDYDDFHGFVHGRLPYNLLKPDPIIKGILLSLPMRKVVFTNSDEAHAGRVLQRLGLEDCFERIISFETLNPFNKLNDPENKLGNGSRAISTGIFDFYEYLSKPDSDIVLPRTPVVCKPFQDSFEKVFSLASIDPQRTLFFDDSIRNLATGKSLGLHTVVVGTSVRTAGVDHALESIHNMKEAFPELWEAAEKSEGVKYSRKVSIETSVIA 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00402 290 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 16 240 IPR010237 -
Aip08g00402 290 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 11 272 - -
Aip08g00402 290 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 192 240 IPR006439 -
Aip08g00402 290 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 290 - -
Aip08g00402 290 SUPERFAMILY HAD-like 14 266 IPR036412 -
Aip08g00402 290 SFLD C1.5.3: 5'-Nucleotidase Like 11 272 IPR010237 -
Aip08g00402 290 Gene3D - 81 267 IPR023214 -
Aip08g00402 290 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00402 Aip-Chr8 3087803 3090603 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00402 K07025 - gmx:100790444 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00402 08 3087803 3090603 Aip08g00402 08 3087803 3090603 ECH
Aip08g00402 08 3087803 3090603 Aip03g00493 03 4778126 4788907 PCT