Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00353 ATGGGTTTTGTGTTAGTGTTAGTTAGCATGGTTTTGGTGTTGGGTTGTGGTGATGGTGAGGGTAAAGAGTGCACAAACCAGCCTACACAATCACACACATTTCGTTACCATTTGTTAACATCTAAAAACCAAACACGGAAACAAGAGGTAATGTCACATTCGCGCTATCATTTGACTCCAATAAGGAACATGTCCTTGAATGAGGAACAAGAAGAAGAAGAAGAAGGGCAAGATGATGATTGGACAATGCTGTATGGGAGAATGAAGATGAAGAAGGAACCAGAGGGTTTACTGAAAGAAGTTTCGTTGCATGATGTGAGGTTGCATGGAGGTTCAATCCATGGTCAAGCACAGAACACAAACTTGAAGTATCTGTTAATGTTGGATGTTGACAGGTTGATTTGGAGCTTCAGGAAGACTTGTGGTCTCCCTACTCCTGGAACACCATATGGAGGCTGGGAAGATCCAACCATAGAAGTCCGGGGTCATTTTGTTGGGCATTATTTGAGTGCATCAGCTCTAATGTGGGCTAGCACACACAATGAAGAATTGAAGAAGAAAATGTCAGCACTTGTTGCAAATCTCTCTATCTGTCAGCAGAAGATTGGGACAGGATACCTTTCTGCATTTCCATCTGAGTTCTTTGATCGTTTTGAAGCAATTCAATATGTTTGGGCTCCCTATTATACCATTCACAAGATCATGGCTGGCCTTTTGGATCAACATTCCATAGCTGAGAACCCTCAAGCTCTGAAAATGGTGACATGGATGGTTGATTATTTTTACAAGAGAGTGAGGAATGTGATAAGAAAGTACAGCATAGATTGGCATTATCAAACCCTGAATGAGGAAACTGGAGGAATGAATGATGTCCTTTACAGACTATATTCCATCACAGGAGATCCAAAGCATCTATTACTTGCTCATCTTTTTGACAAGCCATGCTTTTTGGGGTTGCTTGCTGTAAAGGCTAATGATATAGCTCAATTTCATGCTAATACACATATCCCAGTTGTTGTTGGATCTCAAATGCGATATGAAGTCACCGGTGATCCGCTTTATAAGGAAATTGGAACATTCTTTATGGATATTGTTAACTCTTCACACAGCTATGCAACTGGAGGAACATCAGTGAATGAGTTATGGTCTGATCCAAATAGAATGATAGAGACCCTAAAAGAAACAAACAATGAAGAATCATGCACAACTTATAACATGTTGAAGGTTTCGCGCAACCTGTTTAGATGGACTAAGGAGATATCATATGCTGATTATTATGAACGTGCATTGACAAATGGAGTATTAAGCATTCAAAGAGGAACAGAACCTGGAGTTATGTTATACTATCTTCCACAAGGTCCTGGGGCCTCCAAGGCTATATCAAAATTCGGTTGGGGAACTCAGTTTAACTCTTTCTGGTGCTGCTATGGAACCGGAATTGAATCATTCTCAAAGCTTGGAGATTCCATCTACTTTGAAGAGGAAGGGAAAAATCCTAGTCTCTACATCATTCAATACATATCAAGCTCATTAAACTGGAAATCTGCTCAAATCATGCTTAACCAGACAGTTGTTCCTCCATCTTCAATGGATTCTTTTCTCAGAATCTCACTCACTTTTTCTCCTACTAAGAAAACTAGTAGTACTTCATCTACTCTTAACCTTCGGTTACCAACTTGGACACATATCCATGGTGCTAAACTCACATTAAATTCTGATACTTTACCTTTGCCTTCTCCAGGAAACTTTGTGTCAATCACGCGGAAATGGAGTGGTAGTGACAAGTTGACCCTTCAATTTCCCATTCCCCTAAGAACAGAGGCCATCAAAGATGACAGGCCTGAATATGCCTCCATTAGAGCAATTCTCTATGGTCCCTACCTTCTTGCTGGACATAGCACTGCTGATTGGGACATTAAAACTGCTTCCAATGCTTCTATTACAGATTGGATTACTCCAATTCCAGCCATTTACAATACTCAGTTATTTTCATTCTACCAACACTTTTCAGGATCATCTTTTATCTTAACAAGTTTAAAAAATTCACTGACAATGAAAAAATCACCAAAGCCTGGGACTAGTTTGGCTCTTCATGCAACCTTTAGAATCATTAATATCCAAGCAAAACATTCCTCAAGGATTTCAACTACACTGAGAGATTTTATTGGCAAATCAGTGATGTTAGAACCGTTTGATCTTCCTGGAACACAAGTAGGTTCTGTTTTTGTTCTGGTATCAGGATTGGATGGAAGAAATGAAAGCATATCCTTAGAATCCAAAAGCCATAAAGGGTGCTTTGTGCATAGTGGCATGAGTTCTGGTAAAGAAGTAAAAATAAGATGCAAGTCTAATTCTGATGCTGATGCTTCTAGTTTCAACAAAGATGCAAGCTTTATTGCTAGAAGAGGACTCAGAAAATATGATCCTATAAGCTTTGTGGCTAAGGGAGCAAATAGGAATTTTCTACTGGAGCCATTATTGGCCTTCAGAGATGAGCATTATACTGTTTATTTCAACATTCAAGAGTGA 2529 0.3934 MGFVLVLVSMVLVLGCGDGEGKECTNQPTQSHTFRYHLLTSKNQTRKQEVMSHSRYHLTPIRNMSLNEEQEEEEEGQDDDWTMLYGRMKMKKEPEGLLKEVSLHDVRLHGGSIHGQAQNTNLKYLLMLDVDRLIWSFRKTCGLPTPGTPYGGWEDPTIEVRGHFVGHYLSASALMWASTHNEELKKKMSALVANLSICQQKIGTGYLSAFPSEFFDRFEAIQYVWAPYYTIHKIMAGLLDQHSIAENPQALKMVTWMVDYFYKRVRNVIRKYSIDWHYQTLNEETGGMNDVLYRLYSITGDPKHLLLAHLFDKPCFLGLLAVKANDIAQFHANTHIPVVVGSQMRYEVTGDPLYKEIGTFFMDIVNSSHSYATGGTSVNELWSDPNRMIETLKETNNEESCTTYNMLKVSRNLFRWTKEISYADYYERALTNGVLSIQRGTEPGVMLYYLPQGPGASKAISKFGWGTQFNSFWCCYGTGIESFSKLGDSIYFEEEGKNPSLYIIQYISSSLNWKSAQIMLNQTVVPPSSMDSFLRISLTFSPTKKTSSTSSTLNLRLPTWTHIHGAKLTLNSDTLPLPSPGNFVSITRKWSGSDKLTLQFPIPLRTEAIKDDRPEYASIRAILYGPYLLAGHSTADWDIKTASNASITDWITPIPAIYNTQLFSFYQHFSGSSFILTSLKNSLTMKKSPKPGTSLALHATFRIINIQAKHSSRISTTLRDFIGKSVMLEPFDLPGTQVGSVFVLVSGLDGRNESISLESKSHKGCFVHSGMSSGKEVKIRCKSNSDADASSFNKDASFIARRGLRKYDPISFVAKGANRNFLLEPLLAFRDEHYTVYFNIQE 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00353 842 PANTHER - 7 841 - -
Aip08g00353 842 Pfam Beta-L-arabinofuranosidase, GH127 106 630 IPR012878 -
Aip08g00353 842 PANTHER PROLINE-TRNA LIGASE (DUF1680) 7 841 - -
Aip08g00353 842 SUPERFAMILY Six-hairpin glycosidases 160 437 IPR008928 GO:0005975
Aip08g00353 842 Gene3D - 722 825 - -
Aip08g00353 842 SUPERFAMILY AbfB domain 739 822 IPR036195 GO:0046373|GO:0046556
Aip08g00353 842 Coils Coil 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00353 Aip-Chr8 2660099 2664178 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00353 K09955 - gmx:100791803 1182.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00353 08 2660099 2664178 Aip08g00353 08 2660099 2664178 ECH
Aip08g00353 08 2660099 2664178 Aip03g00597 03 5837061 5842652 PCT