Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00318 ATGGCTTCAAGCAATGGCATCCCCGCAACCGGAAGCGGTCTCGTCGTCAGCTTCGGCGAGATGCTCATCGACTTCGTTCCCACCGTCTCCGGCGTCTCCCTCGCTGAGGCTCCTGGATTCCTCAAGGCTCCCGGCGGCGCCCCCGCTAACGTGGCCATCGCCGTCGCCAGACTCGGCGGCAAGGCCGCTTTCGTCGGCAAGCTCGGCGATGACGAGTTCGGTCACATGCTTGCCGGGATCTTGAAGGAAAACGGCGTCGTCGCCGACGGGATCACCTTTGACCAGGGCGCACGTACGGCGTTGGCGTTCGTAACCCTACGCGCCGACGGGGAGCGTGAATTCATGTTCTACAGAAACCCCAGCGCCGACATGCTCCTCAAGCCCGAAGAACTCAACCTCGAACTCATCAGATCTGCAAAGGTGTTCCATTATGGTTCAATAAGCTTGATCGTGGAGCCATGCAGATCGGCACACCTGAAGGCAATGGAAGTAGCCAAGGACGCCGGGTGCCTTCTCTCCTACGATCCAAATCTGAGGCTGCCATTGTGGCCATCGGCCGAGGAAGCTCGCAAGCAAATCCGAAGCATATGGGAGAAGGCTGATTTGATCAAGGTCAGCGATGTTGAGCTCGAGTTCCTCACTGAAAGTGACAAGATTGATGATGAGGCTGCCATGTCCTTGTGGCACCCCAACTTGAAGTTGCTCCTTGTCACCCTTGGTGAACATGGTTCTAGGTACTACACCAAGAATTTCCATGGATCAGTAGATGCTTTCCATGTAAATACAGTTGATACAACTGGCGCTGGCGATTCCTTTGTCGGTTCTCTTTTGGCCAAGATTGTTGACGACCAATCCATTCTTGAGGATGAAGCAAGGCTAAGATCAGTTCTCACTTATTCAAATGCATGTGGAGCAATCACCACCACCAAAAAGGGAGCAATCCCTGCCCTTCCCAAGGATGAAGATGTGTTGGCCCTCATCAGGGGAGCATAG 993 0.5458 MASSNGIPATGSGLVVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVARLGGKAAFVGKLGDDEFGHMLAGILKENGVVADGITFDQGARTALAFVTLRADGEREFMFYRNPSADMLLKPEELNLELIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKDAGCLLSYDPNLRLPLWPSAEEARKQIRSIWEKADLIKVSDVELEFLTESDKIDDEAAMSLWHPNLKLLLVTLGEHGSRYYTKNFHGSVDAFHVNTVDTTGAGDSFVGSLLAKIVDDQSILEDEARLRSVLTYSNACGAITTTKKGAIPALPKDEDVLALIRGA 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00318 330 PANTHER BNAA04G18320D PROTEIN 20 329 - -
Aip08g00318 330 Pfam pfkB family carbohydrate kinase 14 319 IPR011611 -
Aip08g00318 330 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Aip08g00318 330 PRINTS Ribokinase signature 195 210 IPR002139 GO:0016301
Aip08g00318 330 PRINTS Ribokinase signature 235 246 IPR002139 GO:0016301
Aip08g00318 330 Gene3D - 13 330 IPR029056 -
Aip08g00318 330 PANTHER HEXOKINASE FAMILY MEMBER 20 329 - -
Aip08g00318 330 SUPERFAMILY Ribokinase-like 15 327 IPR029056 -
Aip08g00318 330 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 45 69 IPR002173 GO:0016773
Aip08g00318 330 CDD bac_FRK 14 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00318 Aip-Chr8 2367240 2370803 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00318 K00847 - gmx:100803713 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00318 08 2367240 2370803 Aip08g00318 08 2367240 2370803 ECH
Aip08g00318 08 2367240 2370803 Aip03g00633 03 6182448 6183840 PCT