Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00633 ATGGCTTCCACCACCGCCCTCCCAGCCACCGGTTCCGGTCTCATTGTAAGCTTCGGCGAGATGCTCATCGACTTCGTCCCCACCGTTTCTGGCGTTTCCCTCGCCGAAGCCCCAGGCTTCCTCAAGGCACCCGGCAGCGCTCCTGCCAACGTCGCCATCGCCGTCTCTCGCCTCGGCGGCAAGTCCGCCTTCGTCGGCAAGTCCGCCTTCGTCGGCAAGCGCGGCGATGATGAGTTTGGCCACATGCTCGCCGGAATCCTCAAGGAAAACAACGTCGTCGCAGACGGCATCGCCTTCGTGACACTGCGCGCCGACGGCGAGTGTGAGTTCATGTTCTATGGGAATCCCAGCGCCGATATGCTCCTCAAGCCCGAAGATCTCAATCTCGATCTCATCAGATCTAACGCTGATGATGGCTCTGAGAAAATTACATTCGGGTTGGGAGACACTCTCTACCGCATGGATGATGGATCTACTATTTCTTTGAATCAAAAGAGCACGTGTTCGTCACGTGCTACGAGCATATGGGAGAAGGCTGACGTCATCAAGGTGAGTGACAATGAGCTGGAGTTCCTTACCGGCAGCGACAAGATCGACTATGCTTCTGCCCTCTCCCTCTGGCACCCCAACTTGAAGCTTCTCCTTGTCACCCTTGGTGAACATGGTTCCAGATACTACACCAAGAAATTCCATGGACAAGTGGATGGTTTTCGTGTTGACACAGTAGATACAACTGGCGCTGGTGATTCCTTTGTTGGCGCTCTACTATGCAAGATTGTCGACGATCATTCCATTCTTGAAGACGAAGCAAGGTTAAGGGACGTAATCAAGTTTGCAAATGCATGTGGGGCAATTACAACTATCAAAAAGGGAGCCATTCCAGCTCTTCCTGCAGAGCATGAAGCCCTTAAGCTCATCAATGGAGCATAG 930 0.5333 MASTTALPATGSGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGSAPANVAIAVSRLGGKSAFVGKSAFVGKRGDDEFGHMLAGILKENNVVADGIAFVTLRADGECEFMFYGNPSADMLLKPEDLNLDLIRSNADDGSEKITFGLGDTLYRMDDGSTISLNQKSTCSSRATSIWEKADVIKVSDNELEFLTGSDKIDYASALSLWHPNLKLLLVTLGEHGSRYYTKKFHGQVDGFRVDTVDTTGAGDSFVGALLCKIVDDHSILEDEARLRDVIKFANACGAITTIKKGAIPALPAEHEALKLINGA 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00633 309 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Aip03g00633 309 PRINTS Ribokinase signature 174 189 IPR002139 GO:0016301
Aip03g00633 309 PRINTS Ribokinase signature 214 225 IPR002139 GO:0016301
Aip03g00633 309 Pfam pfkB family carbohydrate kinase 14 298 IPR011611 -
Aip03g00633 309 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 243 256 IPR002173 GO:0016773
Aip03g00633 309 PANTHER BNAA04G18320D PROTEIN 174 306 - -
Aip03g00633 309 PANTHER BNAA04G18320D PROTEIN 19 134 - -
Aip03g00633 309 PANTHER HEXOKINASE FAMILY MEMBER 174 306 - -
Aip03g00633 309 PANTHER HEXOKINASE FAMILY MEMBER 19 134 - -
Aip03g00633 309 Gene3D - 13 309 IPR029056 -
Aip03g00633 309 SUPERFAMILY Ribokinase-like 15 305 IPR029056 -
Aip03g00633 309 CDD bac_FRK 14 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00633 Aip-Chr3 6182448 6183840 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00633 K00847 - gmx:100812560 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00318 08 2367240 2370803 Aip03g00633 03 6182448 6183840 PCT