Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip08g00307 | ATGCAGATGCTCTCAAGGGCTTCATCTGCCATGGCCACCTTCCCTCCCTCTAGGGTGAGAAGTGGGTTTTGTATGTGGCCAAATGCAAGACAACTTTGCTTTAGAAAAGGGATTCTGTATGGATTCATGAGGTTGTTTTCTACACCATTGAAAACGCTTCGGGTAGCTAGTCGTTCAATCCGAGTAGGACGATTTTGCAGTGTTGCCAGCATGTCTTCCTCCTTGCAGATTGAATTGGTACCATGCTTGAGAGACAATTATGCTTATCTCTTGCATGATGTGAACACGGGTACTGTTGGTGTCGTCGATCCTTCTGAAGCTGTGCCTATCATTGATGCATTGAGCAGGAAAAATATAAATTTGACATACATACTCAACACTCACCATCATTATGATCACACTGGTGGAAATGAAGAGTTGAAAGCAAGATATGGAGCAAAGGTGATTGGTTCAGGAATTGACAAGGAAAGGATTCCTGGCATTGATATCTATTTGAATGATGGCGATAAGTGGATGTTTGCTGGCCACGAGGTGCATGTTATGGACACACCTGGTCACACTCGAGGCCATATAAGCTTTTACTTTCCTGGATCTAAGGCGATATTTACCGGAGACACTCTGTTCAGCTTATCGTGTGGCAAGCTTTTTGAAGGAACTCCTGAACAGATGCAATCGTCTCTTACAAAGATAATGTCCTTGCCAGACGAAACAAGCATCTACTGTGGACATGAGTATACATTGGTTGGTCATTTTTTCCTCTTCGTATCGTATATTCTTTACGGCTAG | 786 | 0.4326 | MQMLSRASSAMATFPPSRVRSGFCMWPNARQLCFRKGILYGFMRLFSTPLKTLRVASRSIRVGRFCSVASMSSSLQIELVPCLRDNYAYLLHDVNTGTVGVVDPSEAVPIIDALSRKNINLTYILNTHHHYDHTGGNEELKARYGAKVIGSGIDKERIPGIDIYLNDGDKWMFAGHEVHVMDTPGHTRGHISFYFPGSKAIFTGDTLFSLSCGKLFEGTPEQMQSSLTKIMSLPDETSIYCGHEYTLVGHFFLFVSYILYG | 261 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip08g00307 | 261 | PANTHER | HYDROXYACYLGLUTATHIONE HYDROLASE | 3 | 249 | - | - | |
| Aip08g00307 | 261 | TIGRFAM | GSH_gloB: hydroxyacylglutathione hydrolase | 78 | 248 | IPR017782 | GO:0004416|GO:0019243 | |
| Aip08g00307 | 261 | SUPERFAMILY | Metallo-hydrolase/oxidoreductase | 75 | 247 | IPR036866 | - | |
| Aip08g00307 | 261 | PANTHER | BETA LACTAMASE DOMAIN | 3 | 249 | - | - | |
| Aip08g00307 | 261 | CDD | hydroxyacylglutathione_hydrolase_MBL-fold | 80 | 243 | IPR035680 | - | |
| Aip08g00307 | 261 | SMART | Lactamase_B_5a | 85 | 243 | IPR001279 | - | |
| Aip08g00307 | 261 | Pfam | Metallo-beta-lactamase superfamily | 88 | 243 | IPR001279 | - | |
| Aip08g00307 | 261 | Gene3D | - | 75 | 255 | IPR036866 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aip08g00307 | Aip-Chr8 | 2317729 | 2320322 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip08g00307 | K01069 | - | gmx:100816314 | 449.129 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Aip08g00307 | 08 | 2317729 | 2320322 | Aip08g00307 | 08 | 2317729 | 2320322 | ECH | |
| Aip08g00307 | 08 | 2317729 | 2320322 | Aip03g00644 | 03 | 6278424 | 6282049 | PCT |