Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00644 ATGCTCTCTAAGCCTTCCTCTGCAATGCCCACCTTCCCTTCTTCCTCTGAGGATAGAAATGGCTTCTGCGTGTGGCCGGATGTGAGACAACTTTGCATTCGAAAGAGTCTTCTATACGGAGTTATGAGACTCTTTTCTTTACCATTGAAAACACTGCGCGGAGCGAGTCGGTCACTGAGAGTAGACCAGTTTTGCAGTGTAGTGAACATTTCCTCCTCATTGCAGATTGAATTGGTGCCTTGCCTTGGGGACAATTATGCATACCTTTTACATGATACAGACACCGGGACAGTTGGTGTCGTTGATCCTTCTGAAGCGGCACCTATCATAGATGTTTTGAGCAAGAAAGATCGAAATTTGACGTATATACTGAACACTCACTACCATCATGATCACACTGGTGGAAATACAGAGTTGAAAGAAAGGTATGGGGCAAAGGTAATTGGTTCGGAAGTAGACAATGACAAAATTCCCGGAATCGATATCTCTTTGAGTGATGGAGATACATGGATGTTTGCAGGCCATGAGGTCCTTATAATGGCTACACCTGGTCACACCCAAGGTCACATAAGTTTCTACTTCCCTGGATCCGGAGCGATTTTCACAGGAGACACCTTGTTCAGCCTATCATGTGGCAAGCTCTTCGAAGGAACCGCTGAACAGATGTTATCTTCTCTTAAAAAGATCATGTCTTTGCCGGATAATACAAATATATACTGTGGCCATGAGCACACACTGAGTAATTCTGAGTTTGCATTGTCTATAGAACCCAAAAACGAGGAACTTCAATTGTATGCTGCACATGTGGCACACCTTAGGAATAAAGGCTTGCCGACGATTCCAACTACGTTGAAGGTAGAAAAGGCTTGCAATCCATTCCTTCGCACGTTTAGCACTGAAATCCGGCGGAAGTTAAATATTGCAGTCACGGCAGATGATGCAGAAGCGCTGCGAATTATCCGGCAAGCGAAGGATAATTTTTAG 984 0.4441 MLSKPSSAMPTFPSSSEDRNGFCVWPDVRQLCIRKSLLYGVMRLFSLPLKTLRGASRSLRVDQFCSVVNISSSLQIELVPCLGDNYAYLLHDTDTGTVGVVDPSEAAPIIDVLSKKDRNLTYILNTHYHHDHTGGNTELKERYGAKVIGSEVDNDKIPGIDISLSDGDTWMFAGHEVLIMATPGHTQGHISFYFPGSGAIFTGDTLFSLSCGKLFEGTAEQMLSSLKKIMSLPDNTNIYCGHEHTLSNSEFALSIEPKNEELQLYAAHVAHLRNKGLPTIPTTLKVEKACNPFLRTFSTEIRRKLNIAVTADDAEALRIIRQAKDNF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00644 327 SUPERFAMILY Metallo-hydrolase/oxidoreductase 74 325 IPR036866 -
Aip03g00644 327 CDD hydroxyacylglutathione_hydrolase_MBL-fold 79 242 IPR035680 -
Aip03g00644 327 Gene3D - 74 327 IPR036866 -
Aip03g00644 327 SMART Lactamase_B_5a 84 242 IPR001279 -
Aip03g00644 327 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 77 327 IPR017782 GO:0004416|GO:0019243
Aip03g00644 327 Pfam Metallo-beta-lactamase superfamily 86 242 IPR001279 -
Aip03g00644 327 Hamap Hydroxyacylglutathione hydrolase [gloB]. 74 327 IPR017782 GO:0004416|GO:0019243
Aip03g00644 327 Pfam Hydroxyacylglutathione hydrolase C-terminus 243 327 IPR032282 -
Aip03g00644 327 PANTHER BETA LACTAMASE DOMAIN 1 327 - -
Aip03g00644 327 PANTHER HYDROXYACYLGLUTATHIONE HYDROLASE 1 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00644 Aip-Chr3 6278424 6282049 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00644 K01069 - gmx:100805615 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00307 08 2317729 2320322 Aip03g00644 03 6278424 6282049 PCT