Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00206 ATGAGGAGGAGAAAATGCGCGGTTACACCCAACTCAATGCAAGTTTCAAACTTTTTGGTGTCGCGGAAATCAATCACTATGACACTGTTTCCAAGACTCATCTTCATCGAGCACCAACGGCATCGCCTTTTCAACCTCACATGCATTTTCTCTGCTTCTTCTTCTTCTTCTTCTTCATCTCAATATCGTTATCTTCGTTCCTCTCCGTTTTCCTCCGCCACCACCCCTTCCCCGCAGACGCAAACTGACGACCCCGCCCACCGTGGAACATCCCCGCGCACGAGGTGGAGCACTTACGGAGACATTTTTGACAGCCACACCAAAAGAGCCCCCGCAATCAGTGATCATGAACTAGAAGAACATGAAGAAGAAAAACAACTGAAAGAAGAAGAACGAAAAGTAGAAGAAGAAGAAGATAGTATTGAAAAACTTCGTCGTGCTCTCGAAAAACGTGAGAGGAGCAGAGTGAAGACCGTCAGCACAGTAAATAATGAACTAGAAGAGCATGAAGAAGATAAACAACTGAAAGAAGAAGAACAAGAAGTAGTAGTAGAAGAAGAAGAAGATGAGGAGGAGGGAGAAGAAGAAGTTGAAGAACCTCGTCGTGCAATCACAAAACAACGTGAGAGAAGCAGAGTGAAGACCGAGAGCTCAATTCATGGTGGAGATGTTCTTCCGGAGAGAATCATTAGCACCAAGAGAAGCGGCGGCGCGAAGGCGAAGAAGCAGTGGCTTTGCTCCAATTGCGGGTACACAGCTGGGAAATGGTGGGGGATATGCCCCTCCTGCGAGTTATCTGGTACAATGAGGGAGTTTCATGAGGCCAAGGTTACTGATGCTGATAAAAGCAGGGCCAAAAGTGGCTTGGCGGTTTGCGAGGATACCATCCGGTTGTGGCTCCCTCAGAACGCTGCCGAGTTGCGTCCTATCAAATTGGAGGAGGTAAACAAAGGATTCAGTCACAAGCAGTGGAGAATCCCTTTGCCTGGTACTTTCGGAACTGAAGTTTCCACTGTGCTTGGTGGCGGTCTTGTACCAGGCTCGTTGACTCTAGTTAGTGGTGATCCTGGTATTGGCAAGAGTACTCTATTGTTACAGATGGCAGCAATGATAGCAAAGGGTTGCAGTGAAGGCAAAGCGTCTCGAGTTTTATACGTATCTGGTGAAGAGAGCCTTGAGCAAATTGGTAACAGAGCAGAACGCCTTGGGATTAAATCAGATATATATTTATATTCAAGTACTGATATTGAGGATATATTGAAGAAAGCTCAGCTTCTCTCTCCTCGTGCTATGGTTGTTGATTCAATACAAACTGTTTATTTGAAAGGGCTATTATCAAGTGCTGGAGGTATTTTGCAGGTGAAGGAATGTACAGCGGCTTTGATGAGATTTGCAAAAACAACTAACATCCCAATTCTATTGGTTGGGCATGTGAACAAAAGTGGAGATGTAGCTGGACCTCGTGTCTTGGAGCATATTGTTGATGTTGTTTTGTATTTGGAAGGTGAGAAGTGTTCTTCCTACCGTATGCTCCGTGCTGTGAAAAATCGGTTTGGATCCACTGATGAGCTTGGAGTTTTTGAGATGGTACAATTGGGACTCAAGGCTGTTCCGAATGCCTCTGAAATATTTATCACTGAGCAACCAACACATTCAGAAGTTTTAACTGGAATAGCTGTTACTGTACTAATGGATGGTTCAAGAACTTTCTTAATTGAAATTCAGGCACTTTGCCTTTGTCCTTCCCCCATTCCAACTTCCTCAGTGGATCTACAAGTTAATGGGATCTCTACAAAAAGAGCTACTATGATAAAATGTGTTCTTATAAAGCAAGCAGGACTTAAGCTCCAAGATAATGCTGTGTTTTTGAATGTTGTTGGTGGATGGACACTTGCAGAGACTGCTGGAGATCTTGCAATAGCAGCTGCAATTTGTAGCAGTTTCATGGAGTTCCCTATCCCAAAAGGTGTTGCATTCATAGGCGAAGTTGGCCTCGGTGGAGAGCTGCGCATGGTCCCAAGAATAGAGAAAAGGGTAAACACGGTGGCAAAGCTAGGCTACAGAACTTGTGTTATACCAAAGCAAGCTGAAAAGGTTTTAGAAACTGAAGGTCTAGGAAATATGAGAGTTATAGGTTGCAACAATCTGAAAGAGGTTTTGGATGCTATATTCATCATAGAATGA 2184 0.4423 MRRRKCAVTPNSMQVSNFLVSRKSITMTLFPRLIFIEHQRHRLFNLTCIFSASSSSSSSSQYRYLRSSPFSSATTPSPQTQTDDPAHRGTSPRTRWSTYGDIFDSHTKRAPAISDHELEEHEEEKQLKEEERKVEEEEDSIEKLRRALEKRERSRVKTVSTVNNELEEHEEDKQLKEEEQEVVVEEEEDEEEGEEEVEEPRRAITKQRERSRVKTESSIHGGDVLPERIISTKRSGGAKAKKQWLCSNCGYTAGKWWGICPSCELSGTMREFHEAKVTDADKSRAKSGLAVCEDTIRLWLPQNAAELRPIKLEEVNKGFSHKQWRIPLPGTFGTEVSTVLGGGLVPGSLTLVSGDPGIGKSTLLLQMAAMIAKGCSEGKASRVLYVSGEESLEQIGNRAERLGIKSDIYLYSSTDIEDILKKAQLLSPRAMVVDSIQTVYLKGLLSSAGGILQVKECTAALMRFAKTTNIPILLVGHVNKSGDVAGPRVLEHIVDVVLYLEGEKCSSYRMLRAVKNRFGSTDELGVFEMVQLGLKAVPNASEIFITEQPTHSEVLTGIAVTVLMDGSRTFLIEIQALCLCPSPIPTSSVDLQVNGISTKRATMIKCVLIKQAGLKLQDNAVFLNVVGGWTLAETAGDLAIAAAICSSFMEFPIPKGVAFIGEVGLGGELRMVPRIEKRVNTVAKLGYRTCVIPKQAEKVLETEGLGNMRVIGCNNLKEVLDAIFIIE 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00206 727 MobiDBLite consensus disorder prediction 181 197 - -
Aip08g00206 727 MobiDBLite consensus disorder prediction 198 217 - -
Aip08g00206 727 MobiDBLite consensus disorder prediction 67 220 - -
Aip08g00206 727 SUPERFAMILY Ribosomal protein S5 domain 2-like 515 723 IPR020568 -
Aip08g00206 727 ProSiteProfiles RecA family profile 1. 325 478 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Aip08g00206 727 Gene3D - 545 726 IPR014721 -
Aip08g00206 727 Pfam Subunit ChlI of Mg-chelatase 609 695 - -
Aip08g00206 727 PANTHER DNA REPAIR-LIKE PROTEINRADA 32 724 - -
Aip08g00206 727 Coils Coil 113 154 - -
Aip08g00206 727 Pfam Rubredoxin metal binding domain 244 271 IPR041166 -
Aip08g00206 727 TIGRFAM sms: DNA repair protein RadA 238 719 IPR004504 GO:0003684|GO:0005524|GO:0006281
Aip08g00206 727 MobiDBLite consensus disorder prediction 67 101 - -
Aip08g00206 727 Coils Coil 159 196 - -
Aip08g00206 727 PANTHER DNA REPAIR PROTEIN RADA 32 724 - -
Aip08g00206 727 Pfam AAA domain 337 482 - -
Aip08g00206 727 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 335 529 IPR027417 -
Aip08g00206 727 PRINTS DNA repair protein radA signature 246 270 - -
Aip08g00206 727 PRINTS DNA repair protein radA signature 338 366 - -
Aip08g00206 727 PRINTS DNA repair protein radA signature 434 458 - -
Aip08g00206 727 PRINTS DNA repair protein radA signature 473 501 - -
Aip08g00206 727 PRINTS DNA repair protein radA signature 508 534 - -
Aip08g00206 727 Gene3D - 335 530 IPR027417 -
Aip08g00206 727 MobiDBLite consensus disorder prediction 108 180 - -
Aip08g00206 727 SMART AAA_5 346 504 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00206 Aip-Chr8 1428072 1435229 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00206 K04485 - gmx:100791181 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00206 08 1428072 1435229 Aip08g00206 08 1428072 1435229 ECH
Aip08g00206 08 1428072 1435229 Aip09g00475 09 5016677 5021612 PCT