Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00115 ATGGACTATAATAACTATAACGCTTCTTCAACCACTGAGACAAAAACCAGAGCCAACAAGTTCCTTAACACTGCAGTAATGATGAACAATGACAACCATTCCTGCCACCAACATCATGAAGAAGAAGAAGAAGAAACGCATTGCTGGTTTGATGATGCATGCATTCTGGACATGGACTACTTCGTGAAGACCCTCTCAGGAATCAAGCAAAAAGGTGTTCGTTCTGATTTGATAGGATCAATCATAACTCATTATGCTTCCAAATGGCTCCCTGACCTTTCTTCTTCAACTGACATCTTTTCTGATAACAAGGATCGTCTTACATCACCGGAGAGTGTCACAGCTTCATGGCTAAAGAAGAGGTTCTTTGTTGAAACCTTGGTTGGTGTTCTTCCACCAGAGAAAGATTCCATTCCATGCAACTTCCTCCTGAGGCTCCTAAGAACAGCTAACATGGTTGGGGTTGAGGGAAGTTACAGGTTAGAGCTTGAGAAGCGGATTTCATGGCAGCTAGACCAGGCTTCATTGAAGGAGCTTATGATACCTTCGTTTAGCCACACTTGTGGGACACTGCTTGATGTTGAGATTGTGATAAGGTTGGTGAAGAGGTTCGTGTGCTTGGACCATGAAGGTGTTAAGAGTGGTGCTGCTTTGGTTAAGGTGGCTAAGTTGATTGATTCCTACCTTGCTGAGGCTGCTTTAGATGCTAATCTCACCTTGTCTGAGTTTGTTGCACTCGCCGGAGCTCTTCCAACTCATGCAAGAGCCACTGATGATGGCTTGTACAGAGCCATTGATACTTATCTCAAAGCACATCCAAGTGTGGCAAAGCAAGAAAGGAAGGGTCTGTGTAGGCTTATTGATAGCAGAAAACTCACACCAGAGGCCTCACTTCATGCAGCTCAAAATGAACGATTACCTGTGAGAGCTGTTATTCAAGTTCTCTTCTCTGAACAAACTAAGCTAAACCGCCATTTGGACTGGAGTAGTGGCTCCTTCAGTGGCCTCAGGAGCCCCTGCAATGGCAGCTTAGACACGCCTTTACGGTGCCTGTCAAAGCGCGAAATGAGTGCTCAGCAGATCGAGATAAGGAAGCTGAAAGAAGAGGTTTATAGGCTGCAAAACCAGTGCAATGCAATGCAGGTGCAGCTGGAGAGAATGGTGGAGAAGAAGAAAGGTTTGTTCTTCAAGTTGAAGAAGTTTGGTATTGGTAATAGAAGCAGCAGCATTGTGGGAGAGGTAGAGAAGATTATGGAACAAGAGAGTGGCAGGTTTGGAAGGGAAACGCCAATGGACTTAAAAAGTGGTGTGTTAGGTGTTATGACTCCTCACAAGTGGAGGAAATCTACCTCCTGA 1356 0.4499 MDYNNYNASSTTETKTRANKFLNTAVMMNNDNHSCHQHHEEEEEETHCWFDDACILDMDYFVKTLSGIKQKGVRSDLIGSIITHYASKWLPDLSSSTDIFSDNKDRLTSPESVTASWLKKRFFVETLVGVLPPEKDSIPCNFLLRLLRTANMVGVEGSYRLELEKRISWQLDQASLKELMIPSFSHTCGTLLDVEIVIRLVKRFVCLDHEGVKSGAALVKVAKLIDSYLAEAALDANLTLSEFVALAGALPTHARATDDGLYRAIDTYLKAHPSVAKQERKGLCRLIDSRKLTPEASLHAAQNERLPVRAVIQVLFSEQTKLNRHLDWSSGSFSGLRSPCNGSLDTPLRCLSKREMSAQQIEIRKLKEEVYRLQNQCNAMQVQLERMVEKKKGLFFKLKKFGIGNRSSSIVGEVEKIMEQESGRFGRETPMDLKSGVLGVMTPHKWRKSTS 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00115 451 Coils Coil 356 383 - -
Aip08g00115 451 Pfam NPH3 family 48 297 IPR027356 -
Aip08g00115 451 ProSiteProfiles NPH3 domain profile. 47 321 IPR027356 -
Aip08g00115 451 PANTHER OS12G0117600 PROTEIN 39 451 IPR043454 -
Aip08g00115 451 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 39 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00115 Aip-Chr8 682743 685451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00115 49 326 EF-hand Containing Proteins AT3G44820 37.049 4.72e-53 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00115 - - gmx:100777820 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00115 08 682743 685451 Aip08g00115 08 682743 685451 ECH
Aip08g00115 08 682743 685451 Aip09g00268 09 2451105 2454146 PCT