Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00051 ATGTCGTCCCTCAGTAGGGAGTTGGTGTTCCTGATCTTGCAGTTTCTGGACGAGGAAAAGTTCAAAGAGACTGTTCATAAGCTTGAACAGGAGTCTGGGTTTTTCTTTAACATGAAGTATTTTGAGGATGAAGTGCACAATGGCAATTGGGATGAGGTTGAGAGGTATCTCTCTGGTTTCACTAAAGTAGATGATAATAGGTACTCTATGAAGATATTTTTCGAGATAAGGAAGCAGAAGTACCTGGAGGCATTGGATAAGCATGATCGGTCCAAGGCTGTAGAGATATTGGTGAAGGATTTGAAGGTCTTTGCAACATTTAATGAAGAACTTTTTAAGGAAATCACACAGCTTTTGACATTGGAGAATTTCAGGGAAAATGAACAATTGTCTAAATATGGCGATACGAAGTCTGCAAGAGCAATCATGTTGGTTGAGCTAAAAAAACTAATCGAAGCAAATCCTTTATTCCGTGACAAGTTGCAATTTCCCAACCTTAAAAACTCAAGGTTACGTACTCTCATCAATCAAAGCTTGAATTGGCAGCATCAACTTTGTAAGACTCCACGTCCAAATCCAGATATAAAAACACTTTTTGTGGATCACTCATGTGGACAACCCAACGGTGCAAGAGCTCCATCTCCTGCTAATAATCCACTACTAGGATCCTTGCCAAAGGCTGGAGGGTTTCCTCCTCTTGGTGCACATGGGCCTTTTCAACCTACTCCAGCACCTGTGCCAACACCCCTGGCTGGTTGGATGTCAAATCCTACCACTGTAGCACATGCTGCAGTTTCTGGAGGAGCCACTATAGGTCTTGGTACTGCTACAGGTCTTGGTGCACCATCAATCCCTGCTGCTTTGAAGCACCCTAGGACCCCTCCGACTAATCCTTCTGTTGACTACCCATCTGGAGATTCAGATCATGTCTCTAAGAGAACAAGACCAATGGGAATGTCGGATGAGGTAAATCTTCCTGTCAATGTGTTGTCAGCCACGTTCCCAGGTCATGGTCATGGCCAGGCTTTTAATGCACCAGATGACTTGCCAAAGACTGTTATGCGGACTCTGAACCAGGGTTCATCTCCTATGAGCATGGACTTCCATCCAGTTCAACAGACTATACTTCTTGTTGGTACAAATGTTGGGGACATTGCTTTGTGGGAAGTGGGTTCTAGGGAGCGGTTGGTCTTGAGGAATTTCAAAGTTTGGGATCTTAGTGCCTGTTCAATGCCATTTCAGGCTGCTCTTGTCAAAGATCCAGGTGTTTCTGTCAACCGTGTGATTTGGAGTCCAGATGGTGCTTTATTCGGAGTTGCTTACTCAAGGCACATTGTTCAGATATACTCTTATCATGGTGGCGATGAAGTACGGCAGCACCTGGAGATTGATGCTCATGTTGGTGGAGTAAATGACTTAGCATTTTCCCATCCAAATAAACAACTATGTGTGATAACTTGTGGTGATGATAAGACCATTAAGctccgccacTGGGTGTGGGATGCTGCTACGGGTGCAAAGCAGTATACCTTTGAAGGTCACGAGGCTCCAGTTTATTCTGTCTGCCCACATTATAAAGAAAACATTCAGTTCATCTTTTCAACAGCATTAGATGGAAAGATAAAAGCATGGTTGTATGACAATTTGGGATCTCGTGTTGATTATGATGCTCCTGGTCGTTGGTGCACCACCATGGCCTATAGCGCTGATGGTACAAGGCTCTTTTCATGTGGGACAAGCAAGGATGGGGAATCCTCTATTGTTGAGTGGAATGAAAGCGAGGGAGCTGTTAAAAGGACCTATCAAGGATTTCGCAAACGATCTTTGGGTGTTGTACAATTTGATACAACCAAAAATCGATTTTTGGCTGCGGGTGATGATTTCTCCATTAAGTTCTGGGATATGGACAATATTCAGCTTTTGACACAAGTTGATGCTGATGGGGGTCTCCCTGCAAGTCCACGGATTCGTTTCAACAAGGATGGAGCTCTTTTAGCTGTCTCAGCAAATGAAAATGGAATTAAAATCTTAGCCAATGCAGATGGTATGCGCTTGTTGCGTTCATTAGAGAATTCTATGTATGATGCATCAAGAACGTCAGAAGCCATGGCGAAGCCTACAATAAATCCAATTTCCACAGCTGCTGCCAGTAGTGCTGCACTTTCAGAAAGGGTCCCATCTGTGGTAGCTATGGCTGGAATGAATGGAGATGCCCGAAACTTGGGAGATGTTAAACCTAGAATAAGTGAAGAATCCAATGATAAGTCAAAGATATGGAAGCTTACTGAAATCAGTGAACCATCTCAGTGTAGATCCTTAAAGCTACCTGAGAATGTACGAGTAACCAAGATATCAAGGTTGATATACACTAATTCAGGCAATGCTATTCTGGCATTAGCTTCAAATGCCATTCATCTGCTTTGGAAGTGGCCGCGAAGTGACCGTAATTCTTCTGGCAAGGCCACTGCCAGTGTGCCACCTCAGCTATGGCAACCTTCAAGTGGCATCCTGATGACAAATGACATTGGTGATAGCAATACTGAGGATGCTGTTCCTTGCTTTGCTCTTTCTAAAAATGATTCTTATGTAATGTCAGCATCAGGGGGGAAGATTTCTCTGTTCAATATGATGACTTTTAAGACAATGACTACTTTCATGCCTCCACCACCTGCTGCAACCTTTCTTGCTTTCCATCCTCAGGATAACAATATCATTGCTATAGGCATGGATGATTCTTCAATTCAGATATATAATGTCCGTGTAGATGAGGTTAAAAGTAAACTCAAAGGCCACACTAAAAGAATCACAGGTCTTGCTTTCTCTCATGTATTGAATGTCTTAGTTTCTTCTGGGGCAGATGCTCAGATTTGTGTGTGGAATACTGATGGATGGGAGAAACAGAAGACTAGATTCTTGCAACTTCCTGCTGGAAGGACTCAACCAGTGCAGGCAGATACACGTGTACAGTTTCATCAGGATCAGATACGCTTCTTGGTTGTACATGAAACGCAGCTTGCAATTTATGAAGCAACGAAACTAGAATGTCTAAAGCAGTGGTTTCCACAAAGTTCTGCTGCACCTATATCGCATGCAACTTTCTCATGCGATAGTCAGCTCATATACGCCAGCTTCTTAGATGCAACAGTCTGTGTGTTTAGTGCTTCAAACCTCAGATTACGCTGTCGAGTCAATCCTTCTGCATATCTTTCTGCAGGTGTCAGTTCTAATGTACAACCGCTTGTAATCGCTGCACATCCACAAGAACCAAATCAATTTGCAGTTGGACTTTCGGACGGTGGAGTGCATGTGTTTGAGCCCCTCGAGTCTGAAGGAAAATGGGGCGTGCCTCCACCCATCGAGAATGGGTCAGCAAGCAATGCAGCAGCTGTCTCAGTTGGTGCTTCTTCAGAAGAAGCTGCCCAGAGATGA 3429 0.4354 MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVERYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDKHDRSKAVEILVKDLKVFATFNEELFKEITQLLTLENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQHQLCKTPRPNPDIKTLFVDHSCGQPNGARAPSPANNPLLGSLPKAGGFPPLGAHGPFQPTPAPVPTPLAGWMSNPTTVAHAAVSGGATIGLGTATGLGAPSIPAALKHPRTPPTNPSVDYPSGDSDHVSKRTRPMGMSDEVNLPVNVLSATFPGHGHGQAFNAPDDLPKTVMRTLNQGSSPMSMDFHPVQQTILLVGTNVGDIALWEVGSRERLVLRNFKVWDLSACSMPFQAALVKDPGVSVNRVIWSPDGALFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKLRHWVWDAATGAKQYTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYDNLGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESSIVEWNESEGAVKRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDNIQLLTQVDADGGLPASPRIRFNKDGALLAVSANENGIKILANADGMRLLRSLENSMYDASRTSEAMAKPTINPISTAAASSAALSERVPSVVAMAGMNGDARNLGDVKPRISEESNDKSKIWKLTEISEPSQCRSLKLPENVRVTKISRLIYTNSGNAILALASNAIHLLWKWPRSDRNSSGKATASVPPQLWQPSSGILMTNDIGDSNTEDAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMTTFMPPPPAATFLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHTKRITGLAFSHVLNVLVSSGADAQICVWNTDGWEKQKTRFLQLPAGRTQPVQADTRVQFHQDQIRFLVVHETQLAIYEATKLECLKQWFPQSSAAPISHATFSCDSQLIYASFLDATVCVFSASNLRLRCRVNPSAYLSAGVSSNVQPLVIAAHPQEPNQFAVGLSDGGVHVFEPLESEGKWGVPPPIENGSASNAAAVSVGASSEEAAQR 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00051 1142 SMART Lish 4 36 IPR006594 GO:0005515
Aip08g00051 1142 MobiDBLite consensus disorder prediction 1114 1142 - -
Aip08g00051 1142 MobiDBLite consensus disorder prediction 1124 1142 - -
Aip08g00051 1142 Gene3D - 838 1113 IPR015943 GO:0005515
Aip08g00051 1142 ProSiteProfiles LIS1 homology (LisH) motif profile. 4 36 IPR006594 GO:0005515
Aip08g00051 1142 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 498 1058 IPR011047 -
Aip08g00051 1142 SMART ctlh 34 92 IPR006595 -
Aip08g00051 1142 ProSiteProfiles Trp-Asp (WD) repeats profile. 928 969 IPR001680 GO:0005515
Aip08g00051 1142 SMART WD40_4 838 875 IPR001680 GO:0005515
Aip08g00051 1142 SMART WD40_4 594 634 IPR001680 GO:0005515
Aip08g00051 1142 SMART WD40_4 1012 1053 IPR001680 GO:0005515
Aip08g00051 1142 SMART WD40_4 548 591 IPR001680 GO:0005515
Aip08g00051 1142 SMART WD40_4 350 389 IPR001680 GO:0005515
Aip08g00051 1142 SMART WD40_4 456 497 IPR001680 GO:0005515
Aip08g00051 1142 SMART WD40_4 411 450 IPR001680 GO:0005515
Aip08g00051 1142 SMART WD40_4 504 545 IPR001680 GO:0005515
Aip08g00051 1142 SMART WD40_4 921 960 IPR001680 GO:0005515
Aip08g00051 1142 SMART WD40_4 1062 1105 IPR001680 GO:0005515
Aip08g00051 1142 SMART WD40_4 878 918 IPR001680 GO:0005515
Aip08g00051 1142 Pfam WD domain, G-beta repeat 463 495 IPR001680 GO:0005515
Aip08g00051 1142 Pfam WD domain, G-beta repeat 927 960 IPR001680 GO:0005515
Aip08g00051 1142 SUPERFAMILY WD40 repeat-like 352 544 IPR036322 GO:0005515
Aip08g00051 1142 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 34 92 IPR006595 -
Aip08g00051 1142 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 1 1140 IPR027728 GO:0006355
Aip08g00051 1142 SUPERFAMILY YVTN repeat-like/Quinoprotein amine dehydrogenase 988 1123 IPR011044 -
Aip08g00051 1142 ProSiteProfiles Trp-Asp (WD) repeats profile. 612 643 IPR001680 GO:0005515
Aip08g00051 1142 PANTHER TOPLESS-LIKE PROTEIN 1 1140 - -
Aip08g00051 1142 Gene3D - 555 704 IPR015943 GO:0005515
Aip08g00051 1142 MobiDBLite consensus disorder prediction 290 312 - -
Aip08g00051 1142 Gene3D - 328 554 IPR015943 GO:0005515
Aip08g00051 1142 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 928 960 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00051 Aip-Chr8 319871 327661 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00051 - - gmx:100790282 2110.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00191 09 1663723 1671603 Aip08g00051 08 319871 327661 ECH
Aip08g00051 08 319871 327661 Aip08g00051 08 319871 327661 ECH