Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02561 ATGGGTGAACAAACACTAGGTCAAGAACAATCCCTAACACCAACCCCGATTGACCCTCCACCTCAACCTCCCTCCAATACCCCCGCTGCCGCGCCTGTCATCGAGACCACCACCGTTGCCAACGCCACCATTGCTCATGTTTCCCCCACAGAATCCGAACTGAGCAACAATAATGCTCCTCCTCCGCCAACAAACCCTACCGCACCACCTTCCAAAATCCCCCTCCGCCCTCGCAAGATCCGGAAGCTCTCCCCTGACCCCGCCGTCTCCCAGCCTCAATTGTCCTCCGCCGCCATCACTGAACCTCCAAAACCAACCTCATCCTCCAACTCGTCCTCCGCAGCCAAGTCTGCCAGCCGGAGCACCAAAACCGCTCAGCAGCAGCAGCAGCAACAGCAACAACAACAACGAGCCCTAGCGGTTCCGAGGGTTGTAGCGAGGTCGCTATCGTGCGAAGGAGAGGTGGAGATCGCACTCCGCTACCTCCGCAACTCGGATCCGCTCCTCTCCCCTCTAATCGACATCCACCAAGCACCAACCTTCGACAATTTCCACACCCCTTTCCTTGCCCTAACGCGCAGCATTCTCTATCAGCAGCTCGCCTATAAGGCTGGAACCTCTATCTATACTCGATTCATCTCTCTCTGCGGCGGCGAAGCCGGCGTTGTTCCTGAAACCGTTCTTGCCCTAACTCCTCAGCAGCTCCGCCAAATTGGGGTTTCTGGAAGGAAGGCCAGTTACCTTCACGACTTGGCGAGGAAGTACCAGAATGGGATACTCTCCGATTCGGCCATTGTAAATATGGATGATAAATCTCTGTTCACCATGCTCACAATGGTGAACGGGATTGGGTCCTGGTCTGTTCATATGTTCATGATATTCTCACTCCATAGACCCGATGTTCTTCCCATCAACGATCTTGGAGTCCGCAAAGGGGTTCAGCTTCTCTACAATCTTGAGGACTTGCCCCGCCCTTCTCAGATGGATCAGTTGTGTGAGAAATGGAGGCCTTATCGCTCTGTTGCTTCGTGGTATATGTGGAGATTCGTTGAAGCCAAGGGAACGCCTTCTAGTGCGGTGGCTGTGGCCACTGGTGCGAGTTTGCAGCACCACCAGCAGGAGCAGCAGCAGCAACAGCAGCAGCACCCTTCACAGCCTCAGCTTCTGGATCCCATAAACACCATGTTTAATATGGGGGCGGCCTGTGCTTGGGGACAATGA 1221 0.5479 MGEQTLGQEQSLTPTPIDPPPQPPSNTPAAAPVIETTTVANATIAHVSPTESELSNNNAPPPPTNPTAPPSKIPLRPRKIRKLSPDPAVSQPQLSSAAITEPPKPTSSSNSSSAAKSASRSTKTAQQQQQQQQQQQRALAVPRVVARSLSCEGEVEIALRYLRNSDPLLSPLIDIHQAPTFDNFHTPFLALTRSILYQQLAYKAGTSIYTRFISLCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLEDLPRPSQMDQLCEKWRPYRSVASWYMWRFVEAKGTPSSAVAVATGASLQHHQQEQQQQQQQHPSQPQLLDPINTMFNMGAACAWGQ 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02561 406 MobiDBLite consensus disorder prediction 29 58 - -
Aip07g02561 406 SMART endo3end 196 351 IPR003265 GO:0006284
Aip07g02561 406 MobiDBLite consensus disorder prediction 368 390 - -
Aip07g02561 406 Pfam HhH-GPD superfamily base excision DNA repair protein 193 336 IPR003265 GO:0006284
Aip07g02561 406 SUPERFAMILY DNA-glycosylase 180 349 IPR011257 GO:0003824|GO:0006281
Aip07g02561 406 MobiDBLite consensus disorder prediction 88 135 - -
Aip07g02561 406 PANTHER BNAC05G15000D PROTEIN 64 400 - -
Aip07g02561 406 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 64 400 - -
Aip07g02561 406 CDD ENDO3c 188 349 IPR003265 GO:0006284
Aip07g02561 406 MobiDBLite consensus disorder prediction 59 73 - -
Aip07g02561 406 Gene3D - 161 348 - -
Aip07g02561 406 Gene3D Hypothetical protein; domain 2 185 298 - -
Aip07g02561 406 MobiDBLite consensus disorder prediction 14 28 - -
Aip07g02561 406 MobiDBLite consensus disorder prediction 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02561 Aip-Chr7 106418831 106422982 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02561 K01247 - gmx:100790760 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00804 05 10724195 10725199 Aip07g02561 07 106418831 106422982 ECH
Aip07g02561 07 106418831 106422982 Aip05g00804 05 10724195 10725199 ECH
Aip07g02561 07 106418831 106422982 Aip07g02561 07 106418831 106422982 ECH