Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00804 ATGAAGCGAACTCGATCTCAAACCAAAGAAAGCATTTCCGTCTCCAAATCAGAATCCCTAACCGCTTCCTCTTCCAAACTCCCATTTCGCGCCAAAAAGATCCCAAGACTCCCCTCTTCCTCCAACAACAACAAGAACAAAGAAACCCTCATTCCCGAAGATTCAACACCACCACCACTACCTACTCCGAAACCGTTGACTTCTACAGGGGAAATGGAGCTCGCACTTCACCACCTCCGTGCCGCCGATGTCACCCTCGCCGCCTGCATCGACGCCTTCCCGACGCCGCACTTCCACACTCACCGCTCTCCCTTCTTCTCCCTCGTCAAGAGCATCATCTCCCAGCAGCTCTCCAACAAGGCCTCCCAATCCATCGAGGACCGTTTCGTCGCCCTCTGCGGCGGCCCACACTCAGTTGGGCCTGACTCCGTCCTGGCTCTCTCGGCCCAACAGCTCCGCGGAGTCGGGATATCAGGGCCCAAAGCCACCTACCTGCATGATCTGGCAAGCAAGTACCGTGATGGGCTCTTGTCGGATTCGTCCATACTGGAAATGGACGACGAGACTCTCTACAAGAAGCTGACGATGGTGAAGGGAATTGGGCCTTGGTCGGTCCACATGTTCATGATCTTCACACTTCACAGGCCCGATGTTCTGCCAGTTGGAGACCTTGTTGTTAGGAGAGGTGTGGAGCGGTTGTATGGGCTGAAGCCATTGCCTCAGCCTTCGCAAATGGAGAAGCTTTGCGAGAAGTGGAAGCCCTATAGGTCTGTTGGGTCTTGGTATATGTATAGGCTTGTTGAAGCAAAAGGAATATTGCCATTGCCACCACCAACATCCCTACTTTGA 849 0.5383 MKRTRSQTKESISVSKSESLTASSSKLPFRAKKIPRLPSSSNNNKNKETLIPEDSTPPPLPTPKPLTSTGEMELALHHLRAADVTLAACIDAFPTPHFHTHRSPFFSLVKSIISQQLSNKASQSIEDRFVALCGGPHSVGPDSVLALSAQQLRGVGISGPKATYLHDLASKYRDGLLSDSSILEMDDETLYKKLTMVKGIGPWSVHMFMIFTLHRPDVLPVGDLVVRRGVERLYGLKPLPQPSQMEKLCEKWKPYRSVGSWYMYRLVEAKGILPLPPPTSLL 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00804 282 MobiDBLite consensus disorder prediction 36 51 - -
Aip05g00804 282 Gene3D Hypothetical protein; domain 2 102 215 - -
Aip05g00804 282 MobiDBLite consensus disorder prediction 10 26 - -
Aip05g00804 282 MobiDBLite consensus disorder prediction 1 68 - -
Aip05g00804 282 Pfam HhH-GPD superfamily base excision DNA repair protein 109 253 IPR003265 GO:0006284
Aip05g00804 282 PANTHER HHH-GPD BASE EXCISION DNA REPAIR FAMILY PROTEIN 1 272 - -
Aip05g00804 282 CDD ENDO3c 108 266 IPR003265 GO:0006284
Aip05g00804 282 SUPERFAMILY DNA-glycosylase 95 266 IPR011257 GO:0003824|GO:0006281
Aip05g00804 282 Gene3D - 78 265 - -
Aip05g00804 282 SMART endo3end 113 268 IPR003265 GO:0006284
Aip05g00804 282 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 1 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00804 Aip-Chr5 10724195 10725199 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00804 K01247 - mnt:21403226 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00804 05 10724195 10725199 Aip07g02561 07 106418831 106422982 ECH
Aip05g00804 05 10724195 10725199 Aip05g00804 05 10724195 10725199 ECH
Aip07g02561 07 106418831 106422982 Aip05g00804 05 10724195 10725199 ECH