Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00298 ATGGAGGCACCACCAACCTTTGTGTATAGAGCGAGAATGGCGTTTCATTCCGCAGCTGCAAAAGCGGAGCGGATTCTCAGCGACTTCAAATTCGATCAAGGAGAAGATCAAGAGAACAGCTTCACTAAGAATCTGGAATTTGAAATTGAATCTCCTCACAAGCAGCTTTGCAGTGAGTTGAATAATATAAAGGGGAGGGAATCACCTCATATAGGAAGGAAGAAGGATTGGAAAGAGAGATTCAAGAATATTCGAATTGGGAGAAAAGAATTTGAAGATAAAGTTGGGGATGCAAACATGGCAATTCCATTTTATGATGAAAATTTGTACATCCTGAATATGAAGAATGATCTTGAGGCCAAGGCTGCAGAAGCAGTTCCCTTGGTTGAAAGCTTAACTTCTGATACAAAAGATCCAATTCCTAAGTCATCTGTGCTGAAGCAACTGGCTATAGCTTTTGAGGCTGGAAGTACAACAAAGTCATTGAAAGATTTTACAGCTTCGCCAGTAAGTTCACCAGCCTTGAGTTTCTCAGCAGTGAAGGCTTTAGTGATGCGGGAAAAGGAAGACAAACTTACCTCTGAGTTTAGTGGCGATGAGAGAGTTGTGAATTTGATTAAAGCTCTGTTTGATCCGGAGGGAGATTTTCTCAGTCGAAAGATTGACTCCAATCCAGGGGAAACTTCCATAACATCTTTGTGGGGAGACATTCATGGTGCTCCTCCTGAAAGCTTTGTTGTTAAGCTAGCTGAAATCATTGGAAACTTCAAGTCCATTCGAAAAATGGTTCTTTTCTGGTTCAGGGTTGTTGCTGAACTCAGAAAACATTGGTCTGAGGATCAATATTTACCTGGAGTGCCTCCGGATGATATTCCAGACCTGAAGGCATGTCTTCTGTATCAACAACTTCAAGTAATTAACTGTTGCATCTCTCGGAGAAGGCTCCGTGTTATTGCCACTGACACTCTGGATTCTATGATGATGGAAGCTAGTTCAAACATAAAAGAACCAATCAATTCTGAAGTCAGAAATCCTTCAAGTCCTGTTTTATATGCTAGAGTGAACACTGGGGATCTTGTTCTGCGACTTGGTGCAGTTCGACCAGCTAGAGATCTGACATTGTTGGAAACAGGCGAGCCTGTTTACTGTCCTGCTACCCAGGAAGGGCCTTTGCTTACAGAAGATCTAATCAGAGAAACAGAGGAGTTTGTACTGCGGACAGGGAGTGTTGGTGTTGGGTGTTCTCAACTCCTCTCCGACATGCAGGCTTTCAAGGCTGCAAATCCTGGATGTATTTTGGAGGATTTTGTAAGGTGGTACTCTCCTCCGGACTGGACACAAAATAAGGCAACTGCTGAGGATAGTGATGTTTTTGACGCTGGTGAATCACTTGATGGCAGAGGTTGCCTAAGTCGGCGAATGCAAAAAGAAGGTAATTTGTGGCGTGAATTATGGGAAACATCCAAACCAGTCCCAGCTGTCAAGCAGGCACCCCTCTTTGATGAAGAATTGGCGGTGGAGGGCATCCTCAATGCATTTGAAAAGATCCATACTTCTGAGTTTTTTAGACAGCTATTTGTTTCTCTGCTTGGTTTAGGCATTGAGAATGCAGAACCTATGCTATCCAATAATGGAGACTTCTCAAAGTTATTCTATGAGTGCAAGGAGTACATAGTTTCCACATGTCAAAGCAGCAAATTGAGTGAGCACATTGATGACCTTGTCCAGGTGTATCAAACAGTGGAGACAATGTTACTGAATCCTGAGGAAGCATTGAAAATGATGAAGCAGCCAGAAGAATCAGCTGTAGATGAACCAAAGAGCCGTCTTGCGAGGATTAGGCTTATCTTTAATGGCAAAGATAAACTGTTGAGGAGTCCTGTAACCAAAGATCAGATGAATTCTGAGGAAAAGCCAAAACAATCTTTCTCAAGTTTCTTTGAAGGCAAGTCATTGCTGTTTTCAAAGAAGTTACATAGTCCTCCATCTGGATGCCAATCGCCTGCTATCAAATCTTCGTCTCTCGACACAAATAACAGCTTCGCTGCGCCGGCACTTACTTAG 2064 0.4278 MEAPPTFVYRARMAFHSAAAKAERILSDFKFDQGEDQENSFTKNLEFEIESPHKQLCSELNNIKGRESPHIGRKKDWKERFKNIRIGRKEFEDKVGDANMAIPFYDENLYILNMKNDLEAKAAEAVPLVESLTSDTKDPIPKSSVLKQLAIAFEAGSTTKSLKDFTASPVSSPALSFSAVKALVMREKEDKLTSEFSGDERVVNLIKALFDPEGDFLSRKIDSNPGETSITSLWGDIHGAPPESFVVKLAEIIGNFKSIRKMVLFWFRVVAELRKHWSEDQYLPGVPPDDIPDLKACLLYQQLQVINCCISRRRLRVIATDTLDSMMMEASSNIKEPINSEVRNPSSPVLYARVNTGDLVLRLGAVRPARDLTLLETGEPVYCPATQEGPLLTEDLIRETEEFVLRTGSVGVGCSQLLSDMQAFKAANPGCILEDFVRWYSPPDWTQNKATAEDSDVFDAGESLDGRGCLSRRMQKEGNLWRELWETSKPVPAVKQAPLFDEELAVEGILNAFEKIHTSEFFRQLFVSLLGLGIENAEPMLSNNGDFSKLFYECKEYIVSTCQSSKLSEHIDDLVQVYQTVETMLLNPEEALKMMKQPEESAVDEPKSRLARIRLIFNGKDKLLRSPVTKDQMNSEEKPKQSFSSFFEGKSLLFSKKLHSPPSGCQSPAIKSSSLDTNNSFAAPALT 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00298 687 MobiDBLite consensus disorder prediction 660 687 - -
Aip07g00298 687 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 6 678 - -
Aip07g00298 687 Pfam Rab3 GTPase-activating protein catalytic subunit 362 514 IPR026147 -
Aip07g00298 687 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 6 678 IPR045700 GO:0005096|GO:0043547
Aip07g00298 687 MobiDBLite consensus disorder prediction 658 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00298 Aip-Chr7 2720058 2725845 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00298 K18270 - gmx:100818643 930.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00298 07 2720058 2725845 Aip07g00298 07 2720058 2725845 ECH
Aip01g00684 01 10976228 10983651 Aip07g00298 07 2720058 2725845 PCT