Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00684 ATGGAATCTCATTCGTTGGTGTCGAAAGCGAGAACCGCGTTTCACTCTGCGGCTGCAAAAGCGGAGCGTGTTATCCTGGATTTCAAATCCGNNNNNNATTTTTATTCTGCTGATAAACAATCGGGGAACGATTTGAGGAGGCAGCAGCAGCAGCAGGAGGGACAAGAATCTGTTCATAACGAGAACGATTCCAAGCTTCGCAGCGAATTGAAGAATATAAAGTGGAGACCTCCACATATAGGAATAAAGCAGGATTGGCAAGATAAAATTAACAACCTTCGAAAGGCGAGGAAAGAAGTCGAAGATACAGACAAAGTTGGAGATACAAACATGGCTTGTGTTCCATTTTATGATGAAAATCTGTACCTCCTAAATATGAAACAATATCAGGAAGCCAAGGCTTCTGAAGCAATTCCAACAGTTGAAGGCTTAACTGTTACAGCAAAGGAACCCATTCCTCCATCATCTGTCCTGAAGCAATTGGCTATAGCAGTTGAGGCCGGAAGGAAAACGAACTCGATGAAAGATTTTCTAGCTTCATCAACAAGTTCTTCACCTGCCAGAGAGAAGGCAGGCATAAGTTTCTCTGCTGTTAAGGCTTTAGTGATGCGCGAAAAGGAAGACAAACTTACCTCTGAGTTTAGCAGCGATGAGAAAGTTGTGCATTTGATTAAGTCTCTGTTTGATCCAGAGGGAGGGTTCCTTAGCAGGAAAATCAACATCAATCCCGAGGAAACTGCTATAACATCTTTACTAAGAGATATTCATGGTGCTCCTCCTGAAAGCCTAGTTGTTAAGTTGGCGGAAGTTATTGGAAACTTTAAGACCCTCCGAAAAATGGCTCTTTTTTGGTGCAGAGTTGTTGCCGAACTGAAGAAACATTGGTCTGAAGAAAAATATTTACCCGGAGTTCCTCTAGATGACATTCCAGATTTAAACTCATGTCTTCTATATCAGCAATTTCAAGTAATCAATTGTTGCATCTCTCGGAAAATGCGCTATATTATTGCCACCGAATCCCTGGAGTCTATGATGAAAGAGGCCAATTCAAATATTGGAAGATCTGACAAATATACTGACAGAGCTCCTGCGAAGCCTTTATTATATGCTAAATTAAGTACTGGGGAGCTTGTTCTTCGACTTGGTGCTCATTGCCCATCTGGAGATCTGACAATGCTAGAAACTGGCGAGCCTGTGTACTCTCCTATCACCCAGGAAGGACCCTTGCTTACAGAAGATCTGATCAAAGAAACTGAGGAGTTTGTGCTGCGGACAGGGAGTGTTGGTGCTGGTTGCTCTCAACTTCTCTCTGATATGCAAGCTTTCAAGGCTGCAAATCCTGGTTGTATTCTGGAAGATTTTGTAAGATGGCACTCTCCTCCTGATTGGACAGAAAGTGAGGCAAGTGTCGAGGATAGTGATTTTTTTGAGGGCTGCGAGTCGTCTTCTAGAGGACAGCTAAGTCGGCGAATGCAGAAAGAAGGAAATTTGTGGCGTGAATTGTGGGAAACATCTAAGCCAGTACCAGCCATTAAACAGGCACCTCTCTTTGATGAGGATTTGGCAGTGGAGGGCATACTCGATATATATGAGGATATCCCGCCTTTTGAGCTCTTTGGACAACTGTTTGTTTCATTATTTGGTTTAGGGCTTGCAATAGCAGAAACTATGCTGACTGATAACAGTGACTTTTCAAAGATGTTCAATGACTGCAAGGATTATGCGGTTAGCACTTGTCAAAGCAACAGATGGAGTGAGAAAGTTGATGAACTTGTTCAGGTGTATGAAACAGTGGAGATGATGTTAGTGAATCCAGAGGAAGCACTAAAGATGACAAAACAGACAGAGGATTCAGTTCTGAGCACTGGTGAACTTAAGAACCGGTTTAAGAAGCTTAGCCATGTCTTTGGTGGGAAAGATAAACCAAAAGATCAGGTAAACACTGAGGAAAAGCCAATTCGACAAGCTTTTTCGAATTTCTTCGACAGCAAGTCATCTTTATTTTCAAAGAAGCCCCCAAAACCAGCAAGCCTATCACCTTCCCAGAAATCTTCCTCTCTAGAAAGTGATTGGACATTGGTTTAG 2085 0.4245 MESHSLVSKARTAFHSAAAKAERVILDFKSXXXFYSADKQSGNDLRRQQQQQEGQESVHNENDSKLRSELKNIKWRPPHIGIKQDWQDKINNLRKARKEVEDTDKVGDTNMACVPFYDENLYLLNMKQYQEAKASEAIPTVEGLTVTAKEPIPPSSVLKQLAIAVEAGRKTNSMKDFLASSTSSSPAREKAGISFSAVKALVMREKEDKLTSEFSSDEKVVHLIKSLFDPEGGFLSRKININPEETAITSLLRDIHGAPPESLVVKLAEVIGNFKTLRKMALFWCRVVAELKKHWSEEKYLPGVPLDDIPDLNSCLLYQQFQVINCCISRKMRYIIATESLESMMKEANSNIGRSDKYTDRAPAKPLLYAKLSTGELVLRLGAHCPSGDLTMLETGEPVYSPITQEGPLLTEDLIKETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTESEASVEDSDFFEGCESSSRGQLSRRMQKEGNLWRELWETSKPVPAIKQAPLFDEDLAVEGILDIYEDIPPFELFGQLFVSLFGLGLAIAETMLTDNSDFSKMFNDCKDYAVSTCQSNRWSEKVDELVQVYETVEMMLVNPEEALKMTKQTEDSVLSTGELKNRFKKLSHVFGGKDKPKDQVNTEEKPIRQAFSNFFDSKSSLFSKKPPKPASLSPSQKSSSLESDWTLV 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00684 694 MobiDBLite consensus disorder prediction 664 694 - -
Aip01g00684 694 Coils Coil 83 103 - -
Aip01g00684 694 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 3 693 - -
Aip01g00684 694 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 3 693 IPR045700 GO:0005096|GO:0043547
Aip01g00684 694 MobiDBLite consensus disorder prediction 41 57 - -
Aip01g00684 694 MobiDBLite consensus disorder prediction 39 66 - -
Aip01g00684 694 Pfam Rab3 GTPase-activating protein catalytic subunit 380 530 IPR026147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00684 Aip-Chr1 10976228 10983651 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00684 K18270 - gmx:100818643 954.896
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00684 01 10976228 10983651 Aip01g00684 01 10976228 10983651 ECH
Aip01g00684 01 10976228 10983651 Aip07g00298 07 2720058 2725845 PCT