Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00232 ATGGAGTCCCCACAATCTGTTGTGTCACCATTGAAGAAATCTGTGTTGGTTGATAATGAGAAGCAAAAACATGATGTTTCCTTGTCCAAGGACATTGAAGTCAATGGAACAAAGGATGATTTCATGGGTGTTGTTGATGTTTACATCCATGAGGCCAGGGACATTCATAACATCTGCATATACCACAAGCAAGATGTTTATGCCAAAATTTGTTTGACAAGTGATCCTGATAACTCTGTCTCAACCAAGATCATCAATGGTGGAGGAAACAACCCTGTGTTCAATGAGAATCTAAGTCTAAGTGTTAGGACTGTTGATTCGGCTGTGAAATGTGAGATTTGGATGCTGAGCCGGGTCAGGAACTATCTAGAAGACCAGTTGCTTGGTTTTGCTTTGGTGCCTCTTTCTGAAGTTCTGGTGAATAAGGATTGCAAGCTTGAGAAAGAGTTCTCGCTTTCTTCCACCGATCTTTTCCATTCTCCGGCCGGCTTTGTTCAGCTTTCACTTGCCTACTCCGGTGCTTCCCCTGATGTTATGGCAATATCCTCAATGCCTTTGAAATTGGCTGCAAATGAGATTGACAAGGACTCAGAACCGTGCAGCGAGTCGTTGGTGGAAGATTTAGACAAGATTGAGTTCCCTGATCCGAAAATAGCCAAGGAAGATTGCTTGATGGTTTCGGAATACATAAGCATTCAATGTTCTGAGGATGCTGAAAACCATAGCAGTGTTGAATCAATGCAACCTCCACCTCCTCCTAAGGTTGATTCTCCACCAAGCAGTGTATCAACAAATGGAATCTCGTCTCCTTCGGTGGCTGCAAGCTCAGAATCCTCTGCTGCTAAGGAAGAGAAGAAAACTATGGATGTCAAAAATGGTGATAGTGATTCCTCGAGTAGGGAAGCATTCGCGAAACCTCTTGTGAGTTTGAAAATTGAGCCAGAGCCAGAGCCAAGCATGGTGCAGCAGGACATAGTAGACATGTATATGAAAAGTATGCAGCAATTCACCGAGTCGTTGGCGAAAATGAAGCTTCCTAATATGGACAGTGAGAAGGGAGTAGGTAGCTCAGGTAACTCCGGCAGCTCCGAGCAGAAGCTTCAGGCGTCAAGGAGTGGTAATTCGCGCGTGTTCTATGGTAGTAGAGCTTTCTTCTGA 1158 0.4439 MESPQSVVSPLKKSVLVDNEKQKHDVSLSKDIEVNGTKDDFMGVVDVYIHEARDIHNICIYHKQDVYAKICLTSDPDNSVSTKIINGGGNNPVFNENLSLSVRTVDSAVKCEIWMLSRVRNYLEDQLLGFALVPLSEVLVNKDCKLEKEFSLSSTDLFHSPAGFVQLSLAYSGASPDVMAISSMPLKLAANEIDKDSEPCSESLVEDLDKIEFPDPKIAKEDCLMVSEYISIQCSEDAENHSSVESMQPPPPPKVDSPPSSVSTNGISSPSVAASSESSAAKEEKKTMDVKNGDSDSSSREAFAKPLVSLKIEPEPEPSMVQQDIVDMYMKSMQQFTESLAKMKLPNMDSEKGVGSSGNSGSSEQKLQASRSGNSRVFYGSRAFF 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00232 385 MobiDBLite consensus disorder prediction 237 318 - -
Aip07g00232 385 SMART C2_3c 44 147 IPR000008 -
Aip07g00232 385 Pfam C2 domain 44 143 IPR000008 -
Aip07g00232 385 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 43 173 IPR035892 -
Aip07g00232 385 MobiDBLite consensus disorder prediction 279 298 - -
Aip07g00232 385 Gene3D C2 domain 36 182 IPR035892 -
Aip07g00232 385 ProSiteProfiles C2 domain profile. 20 150 IPR000008 -
Aip07g00232 385 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 238 - -
Aip07g00232 385 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 242 385 - -
Aip07g00232 385 MobiDBLite consensus disorder prediction 352 373 - -
Aip07g00232 385 PANTHER EXPRESSED PROTEIN 242 385 - -
Aip07g00232 385 PANTHER EXPRESSED PROTEIN 1 238 - -
Aip07g00232 385 MobiDBLite consensus disorder prediction 259 278 - -
Aip07g00232 385 MobiDBLite consensus disorder prediction 342 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00232 Aip-Chr7 1996383 1998969 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00232 - - gmx:100781587 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00232 07 1996383 1998969 Aip07g00232 07 1996383 1998969 ECH
Aip01g00605 01 9138652 9141296 Aip07g00232 07 1996383 1998969 PCT