Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00605 ATGGATTCACCACATTCTGTTGTGTCACCATTCAAGAGCTTGGTCTTGAATGAGGCTACTGAGAAGCACAAGCATGATGATGTATTTGAGGTGAATGGAAAAGAGGCTGTGATGTCAAATGGGGATGAAGATTCAATTGGCATGCTTGATGTATATATACACCAAGCTAGGGACATTCAGAACATCTGCATATACCATAAGCAAGATGTTTATGCCAAGATTTGTCTTACTTCTAACCCTGATGACACTGTTTCCACCAAGACCATCAATGGTGGAGGAAGGAACCCAGTGTTCAATGAGAATCTAAGGGTTAGTGTTAGGACTATTGATTCCTCACTCAAATGTGAGATTTGGATGCTTAGCAGGGTCAAGAATTACCTTGAGGACCAGTTGCTTGGTTTTGCTTTGGTGCCTTTGTCTGAGGTACTGCTAGTTCAGGATGGAAAATTGGAGAAAGAGTTCTCTCTTTCTTCAACTGATTTGTTCCATTCTCCGGCCGGTTTTGTTCAGTTGTCGCTTTCTTACGCTGGTGCTTCGCCAGATGTTATGGCGATTTCTACAATTCCTAAGGAGGTTGGAGCGCAGGACTCCGAGACGGGTGAGTCGCTGACGAGGGATTTGGAAAAGATTGAGTTCCCTGATCCTAAGATTGTGAATGAAGATCACTTGATGGCGTCGGAGTATTTCGGCATCCCCTGTGAGGAGACTCAGTGCTCTGCTGATAGCTTGGCAACTTCTGATGGTGAGAATCAGAGCTCTGAAGCGGGTGTTCGCCTCGTGGAAAGCTTCTCTGCTTGCAGTGTTGAGTCTGTTCAGCTTCCTCCCAAGGTTGATTCCCCACCCAGCAGTGTGTCAACAAATGGTGTCACCTCTCCTGTGCCTGCAAGCTCAGAATCATCTGAAGCTGCTGCTGCTAATTCCAAGTCTCCCGGTCAGGAACAAATTTCCAGCACCAAAGATGCTAAAAATGTGGATACTATAGATGGTGAGAGTGATTCCTCAAATGGGGTTCTTCCAAGTGTGTCATTCCCTAAGCCTGTTGTTACTGTGAACCTTGTCCCAGAACCGAATTTGGTGCAGCAGGATATAGTAGACATGTACAACAAAAGCATGCAGCAATTTACTGAGTCATTGGCCAAAATGAAGCTTCCTATGGACATAAAAACTGAGGCAACTAGTTCAGGGAATTCGAGCACTGAGGAGAAGACACCGAAGAGTAACAACTCGCGCGTATTTTATGGTAGCAGGGCTTTCTTCTGA 1260 0.454 MDSPHSVVSPFKSLVLNEATEKHKHDDVFEVNGKEAVMSNGDEDSIGMLDVYIHQARDIQNICIYHKQDVYAKICLTSNPDDTVSTKTINGGGRNPVFNENLRVSVRTIDSSLKCEIWMLSRVKNYLEDQLLGFALVPLSEVLLVQDGKLEKEFSLSSTDLFHSPAGFVQLSLSYAGASPDVMAISTIPKEVGAQDSETGESLTRDLEKIEFPDPKIVNEDHLMASEYFGIPCEETQCSADSLATSDGENQSSEAGVRLVESFSACSVESVQLPPKVDSPPSSVSTNGVTSPVPASSESSEAAAANSKSPGQEQISSTKDAKNVDTIDGESDSSNGVLPSVSFPKPVVTVNLVPEPNLVQQDIVDMYNKSMQQFTESLAKMKLPMDIKTEATSSGNSSTEEKTPKSNNSRVFYGSRAFF 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00605 419 MobiDBLite consensus disorder prediction 272 339 - -
Aip01g00605 419 CDD C2 49 156 - -
Aip01g00605 419 MobiDBLite consensus disorder prediction 386 419 - -
Aip01g00605 419 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 43 177 IPR035892 -
Aip01g00605 419 Pfam C2 domain 48 154 IPR000008 -
Aip01g00605 419 PANTHER EXPRESSED PROTEIN 1 419 - -
Aip01g00605 419 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 419 - -
Aip01g00605 419 MobiDBLite consensus disorder prediction 389 413 - -
Aip01g00605 419 Gene3D C2 domain 42 196 IPR035892 -
Aip01g00605 419 ProSiteProfiles C2 domain profile. 31 154 IPR000008 -
Aip01g00605 419 SMART C2_3c 48 151 IPR000008 -
Aip01g00605 419 MobiDBLite consensus disorder prediction 276 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00605 Aip-Chr1 9138652 9141296 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00605 - - adu:107465117 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00605 01 9138652 9141296 Aip01g00605 01 9138652 9141296 ECH
Aip01g00605 01 9138652 9141296 Aip07g00232 07 1996383 1998969 PCT