Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00159 ATGGTTGTAAAGAGGAGTGATGATGAAGAATCATTGTTTGAGACAACCAAATCAAGAGGGAGCTTCCTACATAGGCTCTTTTCACTGTCTTTGTTTGTTGCCATCTGCTTTGTCTATGCTTACCGGTTGACCCACATACCCACCGGAGGAGAAGACCACGGCGGCGGCGAAGATTACTACTATGGGACATGGACTTGGCTCGGGTTGCTTGCGGCGGAGCTGTGGTTCGGCCTCTACTGGGTCTTGGCTCAAGCCTTCCGGTGGAACTTAGTGTTTAGGAAAACCTTCAAAAAGAGACTCGCTCAAAGATATGAAGAAAGCAAGTTACCAAAAGTGGACATATTTGTGTGCACAGCAGATCCAGATATTGAGCCACCAATAATGGTGATCAACACAGTCTTGTCTCTTATGGCTTATGACTATCCTTCTGAGAAGCTGAGTGTTTATCTCTCTGATGATGCTGCTTCTGATCTCACTTTCTATGCTCTTTTGGAGGCTTCTCTCTTTGCCAAGCATTGGTTACCTTTCTGCAAGAAATTCAATGTTCAACCTACCTCTCCAGCTGCTTATTTTAATAATATCCTTCTTCACCATAATCATGCTAAAGAATTCGCAAACATTAAGAAATTATACGATGAGATGAAAAAGAGAATTGAAGATGCAACTAAGTTGGGAAGAATAGCGAGTGAAGAACGCTCGAAGCATAAAGGATTTTCCCAGTGGGATTCATATTCTTCTCGACGTGACCATGACACAATTCTTCAAATAATACTGCATAAAAAAGAGCCTCATAATTCTAAAGATGAAGATGGGAATTATTTGCCAACTCTTGTGTATTTGGCTCGTGAGAAGAGACCCCAATATCATCACAATTTCAAAGCTGGAGCCATGAACTCCTTGCTAAGGGTGTCATCAGTGATTAGCAATGCAAAGATCATTCTAAATGTAGATTGTGATATGTACTCAAACAGTTCAGAATCAGTAAGGGATGCTCTTTGTTTTTTGATGGATGAAGAGAAAGGCCATGAAATTGCTTTTGTGCAGTTCCCTCAAAAATTTGACAACATTCTCAAGCATGACATATACAGCAGCACTCTATTAACATTAATTGATGTGGAGATGCATGGTGCGGATGGTTATGATGGCCCTTTGTACATCGGAACATGCTGTTTTCATAGAAGAGATGCTCTATGTGGGATGAAGTTCAGTGATAGATACAAGAATGACTTATTAAAGAGTGAGAGAGACAATTGCATAGGAGTAAACTTGAATGAATTAGAAGTAAAATCAAAGGCTCTAGCAAGTTGCACCTATGAAGAAAACACACTTTGGGGAAAAGAGATGGGTGTGATATATGGGTGTCTAGTGGAGGATGTGATGACAGGATTGTGTATACATTTACAAGGATGGAAATCAGTGTACTATAGCCCACCAAGGAAGGCTTTCTATGGTGTTGCTCCAACCACCTTGCTTCAAGCACTTGTTCAGCACAAGAGATGGGCTGAAGGAGAACTTCAAATTCTTCTTTCTAAGCATTGTCCAGCATTCTATGGCCATGGAAGGATCAACTTAGCCCTACAAATGGGATATTCTTACTACAATTGTTGGGCACTCACCTCCTTATCAAAGCTATGTTACTCCATCATCCCTTCACTCTATCTCCTTAGAGGCATTCCCTTGTTTCCAAAGATGTCTAGCATATGGTTCATACCTTTTGCATATGTAATAGTGGGTGAAAGTGCTCGCAGTTTGTTGGAGTTTGTGTTATTTGGAGGCACAATCCAAGGTTGGTGGAATGACTTAAGGATGGTGCTGTACAAGGGAACAAGCTCTTACCTATTTGCTCTCATAGACAACATCTCCAAGTTATTTGGCCTTCCAGATTCTCCCTTTACAGTCACAGCTAAGATCATGGAGGAAGATGTTTCCGAACGATACGAGAAACAAGTTATGGAGTTTGGAGCAGCTTCTCCATTGTTCACTGTATTGGCAACACTTGCATTGCTCAATTTGTTCTGTTTACTTGGCATCTTGAAGGAGTTAGCCCTTAGTGAAGACTGGTTTGAAACTTATAAGAAAATGTCATTGCAAATTCTGTTGTGTGGGTTCTTGGTACTTATCAATATTCCTATATACCAAGGACTTTTCTTAAGGAAGGATAAGGGCAGATTGCCAAGCTCTATTGCCATTAAATCAACAGTATTGGCTCTAAGTATATGCATCCTCTTCAGCATGTTGAAAGATAAATTGTTGTAA 2256 0.4065 MVVKRSDDEESLFETTKSRGSFLHRLFSLSLFVAICFVYAYRLTHIPTGGEDHGGGEDYYYGTWTWLGLLAAELWFGLYWVLAQAFRWNLVFRKTFKKRLAQRYEESKLPKVDIFVCTADPDIEPPIMVINTVLSLMAYDYPSEKLSVYLSDDAASDLTFYALLEASLFAKHWLPFCKKFNVQPTSPAAYFNNILLHHNHAKEFANIKKLYDEMKKRIEDATKLGRIASEERSKHKGFSQWDSYSSRRDHDTILQIILHKKEPHNSKDEDGNYLPTLVYLAREKRPQYHHNFKAGAMNSLLRVSSVISNAKIILNVDCDMYSNSSESVRDALCFLMDEEKGHEIAFVQFPQKFDNILKHDIYSSTLLTLIDVEMHGADGYDGPLYIGTCCFHRRDALCGMKFSDRYKNDLLKSERDNCIGVNLNELEVKSKALASCTYEENTLWGKEMGVIYGCLVEDVMTGLCIHLQGWKSVYYSPPRKAFYGVAPTTLLQALVQHKRWAEGELQILLSKHCPAFYGHGRINLALQMGYSYYNCWALTSLSKLCYSIIPSLYLLRGIPLFPKMSSIWFIPFAYVIVGESARSLLEFVLFGGTIQGWWNDLRMVLYKGTSSYLFALIDNISKLFGLPDSPFTVTAKIMEEDVSERYEKQVMEFGAASPLFTVLATLALLNLFCLLGILKELALSEDWFETYKKMSLQILLCGFLVLINIPIYQGLFLRKDKGRLPSSIAIKSTVLALSICILFSMLKDKLL 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00159 751 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 100 208 IPR029044 -
Aip07g00159 751 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 248 407 IPR029044 -
Aip07g00159 751 SUPERFAMILY Nucleotide-diphospho-sugar transferases 122 512 IPR029044 -
Aip07g00159 751 Coils Coil 204 224 - -
Aip07g00159 751 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 9 742 - -
Aip07g00159 751 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN E1 9 742 - -
Aip07g00159 751 Pfam Cellulose synthase 433 747 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aip07g00159 751 Pfam Cellulose synthase 112 422 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00159 Aip-Chr7 1258221 1263198 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00159 8 746 Glycosyltransferase AT1G55850 53.908 0.0 779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00159 - - gmx:100815825 1018.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00159 07 1258221 1263198 Aip07g00159 07 1258221 1263198 ECH
Aip01g00523 01 7517363 7565722 Aip07g00159 07 1258221 1263198 PCT