Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00523 ATGGGGTACTCTCCATTGTTCGAGACAAATAAAGGAAGAGGGAGAGTGATCTATAGGCCCTTTGCAATCTCATTATTTGTGGCCATATTCTTCATTTGGGTTTATAGACTCACCCACATACCTTCAAAGGTTGAAGATGGCAACATCTGGGTATGGCTTGGTATGTTTGGTGCAGAGTTATGGTTTGGTCTTTATTGGCTTCTCACTCAAGCACTCCGATGGAACCTTGTCTTCAGGCACACTTTCAAGGACACCCTCTCTCAAAGATATGAGGACAAGTTGCCAGGAGTGGACATATATGTGTGTACGGCAGATCCAGAAATAGAACCAGCAATGATGGTGATTAACACAGTTCTCTCTGTAATGGCTTATGACTATCCAACTCATAAGCTTAGTGTCTATCTCTCTGATGATGGCGCTTCAGATATTACTTTCTATGCTCTCTTAGAGGCATCTAATTTTGCTAAGCATTGGTTGCCATTTTGCAAAAAGTTCAATGTTGAACCAAGGTCTCCGGCGGCTTATTTTAATAACATTTTCTCAATGGCACACCAAAATAATCAATATGATGATCACACTCACAATATAGAGTTGGCGGCTATAAAGAAATTATACGACGAAATGGAAAAGAGAATTGAGGACTCGACGAAGATGGGTGAAGTACCCAAAGAAGCACGTTTAAAGCACAAAGGATTTTCTCAATGGGATTCATATTCTTCTAAACGTGACCATGACACAATTCTTCAAATAATACTTGATAAAAAGGACCCAAATAATTCGAAGGACATAGATGGGATTGTTCTACCAACTTTGGTGTATTTGGCTAGGGAGAAGAGACCCCAACATTCCCACAACTTTAAAGCTGGAGCTATGAATTCACTGATAAGGGTGTCATCAATTATTAGCAATGGAAAAATCATTCTTAATGTAGATTGTGACATGTACTCGAACAATGCACAATCTCTAAAGGAAGCACTTTGCTTTCTCATTGATGAAGAAAAAGGCCATGAAATCGCTTTTGTGCAAACGCCACAGGGCTTTGAGAATCTTACAAAGAATGATATCTATGGCGGTGCTCTAAGAGTTATTTATGAGTGGGAATTCCCTGGGATGGATGGTTTTGGTGGACCTATGTACATTGGATCTGGTTGCTTTCATAAGAGGGATACACTATGTGGAAGAAAGTTTAATGATCAAGAAAGCTTGAAGCATTGGAATGGTGAAGATATAAACAATGACCAATCAATAACAAAAACAAGCTTGCATCTATTGGAAGAAAAGTCAAAGGCTCTTTTAAGTTGCACTTATGAGAATAACACACTATGGGGAAAAGAGATGGGACTACTATATGGTTGTGCAGTGGAGGATGTTATAACTGGTTTAGCTATACAATGTAGAGGGTGGAAATCAGTGTACTATAATCCAAAAAGGAAAGCTTTCTTAGGAGTATCTCCAACCACATTGCCAGAAGCATTAGTTCAACATAAGAGATGGTCTGAAGGAGGATTCCAAATTCTGCTCTCTAAGTATAGTGCTGCATGGTGTGCTTATGGATTAATCAGCCCAGGACTTCAAATCACATATTGTTTTTACAATCTTTGGGTCCTTAATTGCTTGCCAACTCTTTATTACTCAATTTTCCCTTCACTTTGTCTCCTCAAAGGGATTTCCTTGTTTCCACAGATGTCAAGTCCATGGTTCATACCATATGCATATGTCACACTTGGTGAAAATACTCAATGCTTGTTGGAATTTTTGTGGTCAGAAGGCACAATAAAAGGTTATTGGAATGACCTAAGGATGTGGCTTTACAAGAGAACAAGCTCATACTTATTTGCCTTGATTGACACCATCTTCAAGTCTCTAGGGTTTTCAAGTTTAGACTTTGTGATCTCAGCTAAGGTAGCTGAAGAAAATGTTTCTCAAAGATATAAGAAGGAGATAATGGAGTTTGGAAACTCTTCCCCAATGCTCACTCTTCTTGCAACACTAGCATTGTTCAATTTGTTTTGTCTTGTTGGTGCCTTATTCAAAGGTGGTCTTGGAATGTTGATGGTGTTGCCATTGCAAGTTCTACTAAGTGTGGTGTTGGTTCTCATCAATTTGCCTTTGTATGAAGGCCTCTTTCTAAGGAAGGACAAGGGAAGATTTCCAACCTCTGTTGTGTTTAAATCAATGGCAGTGGCTCTAAGTGCTTGTGTTCTATCAAATGTGAATGTCTTCACTATAATTTAG 2235 0.3897 MGYSPLFETNKGRGRVIYRPFAISLFVAIFFIWVYRLTHIPSKVEDGNIWVWLGMFGAELWFGLYWLLTQALRWNLVFRHTFKDTLSQRYEDKLPGVDIYVCTADPEIEPAMMVINTVLSVMAYDYPTHKLSVYLSDDGASDITFYALLEASNFAKHWLPFCKKFNVEPRSPAAYFNNIFSMAHQNNQYDDHTHNIELAAIKKLYDEMEKRIEDSTKMGEVPKEARLKHKGFSQWDSYSSKRDHDTILQIILDKKDPNNSKDIDGIVLPTLVYLAREKRPQHSHNFKAGAMNSLIRVSSIISNGKIILNVDCDMYSNNAQSLKEALCFLIDEEKGHEIAFVQTPQGFENLTKNDIYGGALRVIYEWEFPGMDGFGGPMYIGSGCFHKRDTLCGRKFNDQESLKHWNGEDINNDQSITKTSLHLLEEKSKALLSCTYENNTLWGKEMGLLYGCAVEDVITGLAIQCRGWKSVYYNPKRKAFLGVSPTTLPEALVQHKRWSEGGFQILLSKYSAAWCAYGLISPGLQITYCFYNLWVLNCLPTLYYSIFPSLCLLKGISLFPQMSSPWFIPYAYVTLGENTQCLLEFLWSEGTIKGYWNDLRMWLYKRTSSYLFALIDTIFKSLGFSSLDFVISAKVAEENVSQRYKKEIMEFGNSSPMLTLLATLALFNLFCLVGALFKGGLGMLMVLPLQVLLSVVLVLINLPLYEGLFLRKDKGRFPTSVVFKSMAVALSACVLSNVNVFTII 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00523 744 Coils Coil 198 218 - -
Aip01g00523 744 Pfam Cellulose synthase 426 733 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aip01g00523 744 Pfam Cellulose synthase 97 402 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aip01g00523 744 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 87 189 IPR029044 -
Aip01g00523 744 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 4 737 - -
Aip01g00523 744 SUPERFAMILY Nucleotide-diphospho-sugar transferases 112 555 IPR029044 -
Aip01g00523 744 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 4 737 - -
Aip01g00523 744 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 241 479 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00523 Aip-Chr1 7517363 7565722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00523 5 733 Glycosyltransferase AT1G55850 55.313 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00523 - - aip:107645456 1212.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00523 01 7517363 7565722 Aip01g00523 01 7517363 7565722 ECH
Aip01g00523 01 7517363 7565722 Aip07g00159 07 1258221 1263198 PCT