Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00152 ATGCAGAATATGCACCAGGGTTATCCCAGAGAAACATTAGTACGTTTTCTCAAAGCAAGGGATGGGAATGTTCCCAAAGCACATAAAATGTTAATTGATTGCTTGCAATGGAGAGTGGAAAATGAGATTGACAATGTTTTAGCTAGGCCAATCCCGGCCGATTCGTACAGAAACGTGAGAGATTCGCAACTCATTGGAATGTCTGGTTACACAAAAGAGGGTCTACCAGTCATTGCTGTTGGTGTTGGTCTTAGCACATATGGCAAAGTTTCTGACAAATACTATGTACAATCTCACATCCAAATGAATGAATATAGGGATAGGGTGATCTTGCCAACAGCTACCAAGAATCATGGAAGATACATTGGTACCTGTGTGAAAGTCTTGGATATGACAGGCCTAAGACTATCAGCACTGAACCAAATGAAGCTTTTGACATCTATATCTACCATAGATGACTTGAATTATCCAGAAAAGACAGACACATACTATATTGTCAATGCTCCATATGTATTCTCTGCATGTTGGAAGGTTGTAAAGCCTCTTTTGCAAGAAAGAACAAGGAAGAAAGTTCAAGTGCTGCAAGGTTGTGGCAGGGAGGAATTACTTAAGGTAATGGACTATGCATCCCTTCCACATTTTTGCAAGGACTCATCAAAGTTAACCAAACACAATGCAACAATGAATGCTGAAAACTGCTACTCCCTTGATCATGTCTTCCATAAACAACTTTATAATTATATGAAGCAGCAAGCTATGATAATGGAGTCCATATCACAAATCAAACAGGATTCTTTCTATGTAGAATTGCCAGAGACAGACCCAGATGATGCCAGAATTGTCAAGACTATAGAAATTGAGTTCAGGAAAGTGGAAAGCAAGAATGGCCTAAATAATTCACTAAATGGTGTTACTGTTAAAGGTGTTTGA 930 0.3892 MQNMHQGYPRETLVRFLKARDGNVPKAHKMLIDCLQWRVENEIDNVLARPIPADSYRNVRDSQLIGMSGYTKEGLPVIAVGVGLSTYGKVSDKYYVQSHIQMNEYRDRVILPTATKNHGRYIGTCVKVLDMTGLRLSALNQMKLLTSISTIDDLNYPEKTDTYYIVNAPYVFSACWKVVKPLLQERTRKKVQVLQGCGREELLKVMDYASLPHFCKDSSKLTKHNATMNAENCYSLDHVFHKQLYNYMKQQAMIMESISQIKQDSFYVELPETDPDDARIVKTIEIEFRKVESKNGLNNSLNGVTVKGV 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00152 309 Gene3D - 2 264 IPR036865 -
Aip07g00152 309 SUPERFAMILY CRAL/TRIO domain 54 215 IPR036865 -
Aip07g00152 309 CDD SEC14 56 214 IPR001251 -
Aip07g00152 309 SMART CRAL_TRIO_N_2 9 34 IPR011074 -
Aip07g00152 309 Pfam CRAL/TRIO domain 63 214 IPR001251 -
Aip07g00152 309 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 52 223 IPR001251 -
Aip07g00152 309 SUPERFAMILY CRAL/TRIO N-terminal domain 8 47 IPR036273 -
Aip07g00152 309 PANTHER - 2 308 - -
Aip07g00152 309 Pfam CRAL/TRIO, N-terminal domain 9 33 IPR011074 -
Aip07g00152 309 SMART sec14_4 59 220 IPR001251 -
Aip07g00152 309 PANTHER OS09G0258000 PROTEIN 2 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00152 Aip-Chr7 1181199 1184336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00152 3 291 Acyl Lipid Metabolism Gene Families AT1G55840 64.261 1.47e-148 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00152 - - gmx:100817955 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00152 07 1181199 1184336 Aip07g00152 07 1181199 1184336 ECH
Aip01g00519 01 7379232 7382120 Aip07g00152 07 1181199 1184336 PCT