Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g00124 ATGGTTGATGAATTCATGGAGCAATTTCCCTTGATTCATCAAAGCTGTTCTTCTTCATCTTCAGGCAATAATGTGACAAGAGAATCTCCTAAGAGAATTGGTAACGTGTGGAGCGCGATAGCGCACATAATAACAGGAGTGATAGGGGCAGGGGTGCTGTCTCTAGCATGGTCGGTGGCGCAACTAGGTTGGATTGGAGGTCCGATTTGCATTGTGTTATTTGCAGTCACAACCATGGTTTCTTCAAACCTTCTTAGTGACTGCTATAGACACCCTCATCCTGAGTATGGTGCAACCAGGAGTTCCTCCTTCATAGATGCAGTCAAATTATTTTTAGGAGAGAAGAATAAACATGTGTGTGGAGTCATGGCTTATGCAACCATGTTTGGCATTACAACTGCCTTTGTTATTACATCTGCCACCAGCGTCAAGGCTATTCTGAAATCAAATTGTTACCACAAAGAAGCGCATAAAGCTCCATGTAAATATGGGGATACATTGTATATGATGCTATTTGGAGTTGTTCAGATTGTGATGTCATTCATACCTGATCTTCACAACATGGCATGGGTTTCAGTTGTTGCTGCCTTAATGTCCTTCACATATGCTACTATAGGACTTGGACTTGGCATCACAACAGTCATAGAAAATGGAAGAATTATGGGAAGTATAACAGGAGTAGCAGCTTCAAGTACTGCTGACAAATTGTGGTTAATCTTCCAAGCACTTTCTGATATTGCTTTTGCCTATCCATACTCAATCATACTCCTTGAGATACAGGACACTCTAGAGGCTCCTCCATCAGAGAACAAGACCATGAAGAAGGCCTCCATGATTGCCATATTCATCACAACATTCTTCTACCTCTGCTGTGGATGCTTTGGATATGCAGCTTTTGGAGATCAAACACCAGGAAATCTCTTAACTGGCTTTGGTTTCTATGAGCCTTATTGGCTTATTGACTTTGCCAATGCTTGCATTGTTCTTCATTTGATTGGAGGATATCAGATTTATTGTCAACCAATATACAATGCTGTTGATAGATGGTGCCAAAGAAAATACCCAAACAGTGAGTTTGTGAATAAATTCTACAGAATGAAGCTACCAAAGTTACCAGCATTTCAAGTGAATCTATTCAGAATATGTTTCAGAACAACCTATGTTGTTTCCACAACTGGACTTGGAATATTATTCCCTTACTTCAACCAAGTTCTTGGAGTGTTAGGGGCCATAAGCTTTTGGCCATTGGCAATATATTTCCCAGTTGAGATTGGCCACGTGGCAGTGATGTATTTGTCGAGAACGTTTGGGCGAACACTGTTCGCCGCAGCTGCTAGATCCAGAACCTATGCTTCCTCCGCCGGAGCCGCCACTGCTTCCGGCGACAAACCCCGCAACGCTCTTGAGGAGTTCTTCGAGGTTGACAGGGACATGGAAAGTGATAAACCTATTGTATATGGTCGGGGTTGGAAGGCCTCCGAATTGCGTTTGAAGTCTTGGGATGATCTTCATAAGTTATGGTATGTGTTGTTGAAGGAGAAAAACATGCTCATGACTCAACGCCAGATGCTCAATTCCCAGAACCTTCGATTTCCTAACCCGGAACGCATCCCCAAGGTACGGAAGTCAATGTGCCGCATCAAGCAAGTACTTACAGAGAGAGCAATAGACGAACCGGATCCCAGGAGGTCTGCTGAGATGAAGAGAATGATAAATGCTCTCTGA 1725 0.4307 MVDEFMEQFPLIHQSCSSSSSGNNVTRESPKRIGNVWSAIAHIITGVIGAGVLSLAWSVAQLGWIGGPICIVLFAVTTMVSSNLLSDCYRHPHPEYGATRSSSFIDAVKLFLGEKNKHVCGVMAYATMFGITTAFVITSATSVKAILKSNCYHKEAHKAPCKYGDTLYMMLFGVVQIVMSFIPDLHNMAWVSVVAALMSFTYATIGLGLGITTVIENGRIMGSITGVAASSTADKLWLIFQALSDIAFAYPYSIILLEIQDTLEAPPSENKTMKKASMIAIFITTFFYLCCGCFGYAAFGDQTPGNLLTGFGFYEPYWLIDFANACIVLHLIGGYQIYCQPIYNAVDRWCQRKYPNSEFVNKFYRMKLPKLPAFQVNLFRICFRTTYVVSTTGLGILFPYFNQVLGVLGAISFWPLAIYFPVEIGHVAVMYLSRTFGRTLFAAAARSRTYASSAGAATASGDKPRNALEEFFEVDRDMESDKPIVYGRGWKASELRLKSWDDLHKLWYVLLKEKNMLMTQRQMLNSQNLRFPNPERIPKVRKSMCRIKQVLTERAIDEPDPRRSAEMKRMINAL 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g00124 574 Pfam Transmembrane amino acid transporter protein 34 425 IPR013057 -
Aip07g00124 574 Pfam Mitochondrial 39-S ribosomal protein L47 (MRP-L47) 468 554 IPR010729 GO:0003735|GO:0005761|GO:0006412
Aip07g00124 574 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 16 427 - -
Aip07g00124 574 Gene3D - 462 562 IPR038340 -
Aip07g00124 574 PANTHER OS05G0424000 PROTEIN-RELATED 16 427 - -
Aip07g00124 574 CDD Ribosomal_L29_HIP 493 554 - -
Aip07g00124 574 SUPERFAMILY Ribosomal protein L29 (L29p) 490 557 IPR036049 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g00124 Aip-Chr7 953207 965418 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g00124 31 424 Organic Solute Cotransporters AT1G77380 52.020 3.81e-156 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g00124 K24917 - gmx:100781771 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00124 07 953207 965418 Aip07g00124 07 953207 965418 ECH
Aip07g00124 07 953207 965418 Aip01g00484 01 6484702 6488665 PCT