Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00484 ATGGAACTAAAAGACTCTTTCCAAGTATCAAGAATCGGTGATGCCTACGACGACGATGGCCATCCCAAGAGAACCGGAACCGTGAAGAGCGCGGTGGCTCATATTATTACGGCGGTGATTGGATCCGGCGTTCTGTCTCTTGCTTGGAGCACTGCACAGTTAGGATGGATCGGAGGGCCGGTTGCGTTGCTCTGCCTCGCAATCGTCACATATATTTCGTCGTTTCTTTTATCCGATTGTTACAGGACACCGGACCCAGTAACTGGGAAAAGAAACTACTCTTACATGGATGCTGTTACAAACAATCTTGGTAAAAAAAGGACGGTGGTGGCTGGTTTCCTTCAATTTGTGATCTTGTATGGAACTTGTGTCGCATATGTTATTACCACAGCAACCAGTATGAGGGCGATTCTGAAATCAAATTGTTACCACAAGGAAGGGCATGATGCTCCATGCAACTATGGAGATAATCTGTATATGGTGATATTTGGAGCAATTCAGATAGTAATGTCATTCATACCAGATCTTCACAACTTAGCATGGGTTTCAATTGTTGCAGCAGTTATGTCCTTCACATATTCATTCATAGGACTTGGACTTGGCATAGCAACAGTCATAGAAAATGGAAGCATTATGGGTAGGGTAACAGGAATATCAACTAGAACTGCTGCAGACAAAATATGGTTGGTGTTTCAAGCACTTGGCGACATTGCATTCGCTTATCCCTACTCTGTTCTCCTCCTTGAGATTGAGGACACATTAAAGTCTTCTCCACCGGAAAACCAAAGCATGAAGAGGGCATCCATGATTGCAATCTTCATCACAACATTCTTCTATCTCTGTTGCGGATGCTTTGGATACGCTGCGTTCGGAGATTCTACGCCGGGAAACCTGCTCACTGGGTTTGGATTCTATGAGCCTTTCTGGCTTGTTGACATTGCTAATGTTTGCATTATTGTTCATTTGGTTGGAGGATATCAGATTTACAGTCAACCAATATATGGTGCAGTTGAGAGATGGTGCTCAAGAAAATACCCCAACAGTGGGTTTGTGGCAAAATTCCACAAAGTGAAACTACCCCTATTGCCCCGTTTTGAGATCAACCTCTTCAGGTTCTTTTTCAGAACAATCTTTGTGATCACAACAACTGTACTTGCAATCCTTTTCCCTTACTTCAACGAAGTTCTTGGAGTGTTAGGAGCAGTAAACTTTTGGCCATTGGCCATTTACTTCCCAGTGGAGATGTACTTCAAGCAGAACAAAATTGAAGCATGGAGTAATAAATGGATTGTTCTAAACATATTCAGCTTTGCTTGCTTTCTTGTCACTGCTGTGGGACTTGTGGGGTCCATTCAAGGAATTGTACAAGCCAAGCTTAGTTCAAGTTAA 1389 0.4298 MELKDSFQVSRIGDAYDDDGHPKRTGTVKSAVAHIITAVIGSGVLSLAWSTAQLGWIGGPVALLCLAIVTYISSFLLSDCYRTPDPVTGKRNYSYMDAVTNNLGKKRTVVAGFLQFVILYGTCVAYVITTATSMRAILKSNCYHKEGHDAPCNYGDNLYMVIFGAIQIVMSFIPDLHNLAWVSIVAAVMSFTYSFIGLGLGIATVIENGSIMGRVTGISTRTAADKIWLVFQALGDIAFAYPYSVLLLEIEDTLKSSPPENQSMKRASMIAIFITTFFYLCCGCFGYAAFGDSTPGNLLTGFGFYEPFWLVDIANVCIIVHLVGGYQIYSQPIYGAVERWCSRKYPNSGFVAKFHKVKLPLLPRFEINLFRFFFRTIFVITTTVLAILFPYFNEVLGVLGAVNFWPLAIYFPVEMYFKQNKIEAWSNKWIVLNIFSFACFLVTAVGLVGSIQGIVQAKLSSS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00484 462 Pfam Transmembrane amino acid transporter protein 24 455 IPR013057 -
Aip01g00484 462 PANTHER AMINO ACID PERMEASE 7-RELATED 17 459 - -
Aip01g00484 462 PANTHER OS05G0424000 PROTEIN-RELATED 17 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00484 Aip-Chr1 6484702 6488665 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00484 16 455 Organic Solute Cotransporters AT5G09220 55.305 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00484 K24917 - gmx:100818535 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00484 01 6484702 6488665 Aip01g00484 01 6484702 6488665 ECH
Aip07g00124 07 953207 965418 Aip01g00484 01 6484702 6488665 PCT