Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03618 ATGCAATGTCGACGAAGGAGACAAACGACGCTGGCGAACGCAGAAGACCCAACGACGAGATGGCGAAAATGCGGTGTTGGTGACACTGGGATTAGGATTCAAAGGGGTAAGGGAAAGGAATTAAGGTTCAGAAGGAGGGATTTTGGATTGAGGAGAGGGAAAGTGCGTTGGGGAGGGGAGATTAGGGTTAGGGAGGGGGAGGGAAGGATTAGGGTTGGGGAGGGGGGAGAGTGCATTCAAGAAGGGGAAGGGGGGAGTGCATTGGGGAGGGGGAAGAGAAAGAGAATTGGAGGGGAAGGATTAGGGTGGGGGAGGGTTTTTGCCATGTCATCAAAATGTAGTGGCCATGTCAGCATTGTGCTTGTCGGAGATATGCTCCGGCGAACTCGTGGGTTTTCACCAAACAGCCATTTACCATCCCTCCCCTGCTTCCGCCTCACCGACACCGCAAAGCTCCTCGATTCGCTCGAAGAAGAAATCCACCAGAGCCACGAAAACGACGCCGTGGAGAGGCTCTTGAAGGTGCTGATGATGATGAGAACCAAAACGGCGCCGCTGCACGCACTCCAGCCTCTGAAATGGGACCTCGGCCTCCCCGATTGCTTCGAGAAAACCCTAATCCCCAAATTCCCCGAACAGTTCCAGCTGGTAAAGTACCCTAACGGCGTGAGCGGACTGAAAATATCGCAATGGCGGGAAGATCTGGCGGTTTCAGCATTACAGAAGATGAATGAGTGCAGAGAATCAAAGAGAGGAAAAGCTGCATTAGTATTTCCGATGAGGTTCCCGAGGGGTTACGGATCTCATAAAAAGGTTAGGAGTTGGATGGAAGAGTTCGAGAAGCTTCCATGTATATCTCCGTATGCAGATTGCAGTAAAATTTGA 885 0.5175 MQCRRRRQTTLANAEDPTTRWRKCGVGDTGIRIQRGKGKELRFRRRDFGLRRGKVRWGGEIRVREGEGRIRVGEGGECIQEGEGGSALGRGKRKRIGGEGLGWGRVFAMSSKCSGHVSIVLVGDMLRRTRGFSPNSHLPSLPCFRLTDTAKLLDSLEEEIHQSHENDAVERLLKVLMMMRTKTAPLHALQPLKWDLGLPDCFEKTLIPKFPEQFQLVKYPNGVSGLKISQWREDLAVSALQKMNECRESKRGKAALVFPMRFPRGYGSHKKVRSWMEEFEKLPCISPYADCSKI 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03618 294 Pfam Plant organelle RNA recognition domain 140 293 IPR021099 GO:0003723
Aip06g03618 294 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 133 294 IPR045040 GO:0003723
Aip06g03618 294 PANTHER OS04G0546100 PROTEIN 133 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03618 Aip-Chr6 133585690 133587453 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03618 - - aip:107648560 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03618 06 133585690 133587453 Aip06g03618 06 133585690 133587453 ECH
Aip06g03618 06 133585690 133587453 Aip02g02788 02 103901557 103903771 PCT