Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02788 ATGCTCTTCAAACCCCACACCATCTCTTCCCACATCCTCAGCAACCACCTCAACCAACTAAGATCCATTTCGAGCCTCAAAGTCGTTTGGCGCAAAGACCCAGAACTCGACCGTGCAATCGAAAACGACAAGCGTTTCAAGCTATGCGCCCGCGTCGTTCGCGAAGTCCTCAACGAACCCCGCCACGTCATCCCCCTTCGCTACCTCGAAAAGCGTCGCCAAAGAATGCACCTCAAAGTCAAAATCGAAACCTTCCTCAACCATAACCCTGGTTTGTTCGACGTCTACTTGGACCGCATTAAGCCCAAAACCGAACCTGTCCGGTTCATCCGGTTCAGTGCAAAGCTCCAGAACTTTCTAGAAGAACAAAAGAGAATCTTCCAGAAGAACGAGGACTTGATCGTTGCGAAACTCTGTAAGCTTTTGATGATGTCTAAGAATAAAGTTGTTAGTGCTGATAAGTTGCTTCATGTCAAGAAGGAATTCGGTTTTCCTGATGACTTTTTGGTTGATTTGGTACCTAGGTATTCGAATTATTTTAGGTTAATTGGATCACCTGGTGAAGGGCAATCGTTCCTTGAATTGGTTAACTGGGAACCTAAATTTGCGAAATCTGTGATTGAGCATAGGGCTGAGGAGGAGAGTGAGAGGATTGGGATTAGGGTTAGGCCTAATTTTATAGTTCAACTTCCTAGTGGTTTTGTGCTGAAGAAGGATATGAGGGACTGGGTTAGGGATTGGATGGAGCTTGATTATGTTTCGCCTTACGCGGATGTTTCGCATTTGGAGCAGAATTCGAGGGAAATGGAGAAGAGGATGGTTGGTGTGTTTCATGAATTGTTGTCACTTTCACTGTATAAGAGGATTCCGGTGCCGATTTTGGGGAAGTTCTGTGATGAGTATAGATTTTCGAATGCCTTTTCGAGTGTTTTTACAAGGCATTCAGGGATATTTTATATGTCACTGAAAGGAGGGATCGAGACGGCGGTGCTAAGAGAAGCATACGAGGGTGATAAGTTGGTTGATTTGGATCCACTGCTGGAGATAAAGGACAAGTTTGTTGAGTTGTTGGAGGAAGGTTGGCGGCAGAGGGCGGAGGAGTTGAGGTTGAAACAAGAGAAGCTTAGGAGGGATATGGAAAATTCGGCCACCAAAGTTGACCAAATGAGTGTGAAAGAGACCAATGTGGATGGTCGAAGACATGTGGACAATGGAAGACGGAGAGCTTTCAAGGATTTCAGTGAAACAGTGCTACAAGAAAATCTTTGTTTTGGTCCCGCATGA 1284 0.4533 MLFKPHTISSHILSNHLNQLRSISSLKVVWRKDPELDRAIENDKRFKLCARVVREVLNEPRHVIPLRYLEKRRQRMHLKVKIETFLNHNPGLFDVYLDRIKPKTEPVRFIRFSAKLQNFLEEQKRIFQKNEDLIVAKLCKLLMMSKNKVVSADKLLHVKKEFGFPDDFLVDLVPRYSNYFRLIGSPGEGQSFLELVNWEPKFAKSVIEHRAEEESERIGIRVRPNFIVQLPSGFVLKKDMRDWVRDWMELDYVSPYADVSHLEQNSREMEKRMVGVFHELLSLSLYKRIPVPILGKFCDEYRFSNAFSSVFTRHSGIFYMSLKGGIETAVLREAYEGDKLVDLDPLLEIKDKFVELLEEGWRQRAEELRLKQEKLRRDMENSATKVDQMSVKETNVDGRRHVDNGRRRAFKDFSETVLQENLCFGPA 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02788 427 Coils Coil 358 385 - -
Aip02g02788 427 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN 15 387 - -
Aip02g02788 427 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 15 387 IPR045040 GO:0003723
Aip02g02788 427 Pfam Plant organelle RNA recognition domain 32 361 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02788 Aip-Chr2 103901557 103903771 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02788 - - ahf:112754814 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02788 02 103901557 103903771 Aip02g02788 02 103901557 103903771 ECH
Aip06g03618 06 133585690 133587453 Aip02g02788 02 103901557 103903771 PCT