Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03604 ATGAGTATTAGTTTTGAGACATTCACGTGGAAAATCCAAAACTTCTCTAAACAGAACACCAAGAATCTACAATCCAAGGCTTTCCGTATAGGACATCATAAATGGAGGATCCGTTTGTATCCATTAAGGAGGGACGTTAACCATTTCTCGTTGTATTTGATGGTTGCGGATTCTCTACCGGCTTATGGTTGGAGCAGAACCACATATTTCAAGTTGGTTGTTACAAATCAGGTTGATGCCAACAAGTCAATTGTAAAGGAGACTCAGCAGAAGTTCAATGGAGGAAATCGCAGTTGGGGCTCAACATTCCTTACCCTGAGTGACTTCTATGATCCTAACCAAGGGTATCTAGTCAATAACACATGTATCATTGAAGCTCATGTTTGTGTCTCCGATGTTCCGCCTCATGCTATCAAATTAAGAAAAACCAGTAGTAGCATTAGTCCAGCAAGTGACTCTATCTCTATCTTGCTTGATGATCAAGAAACAGAATCAACAGATGGGAGCGAGACACTTACTTCCGCGACCTGCAGGTCTAGTCGAACCGAAGATGAAGATGAATGTTCAGATTTAACACTAAAGGACATCATAAATTTGGACAGTTTGGGTAAAGAAGAAGCATCTTTTTTTCCATTGGTGGAAGATGCCTGCATGTGGCATCCTGATCTAATACAGAGCCAGAGGAACCGAAGCGAACGATTCAAAATATGGGCATTCACATCTTTAGGCCAAGTTCTGCATTTCCTCAAGACAAGCAAGGTGAAGGACATGGATGAAGATGGATGTAATTATCTGAAAGGTTTATGGGAGGAGCTTGTTAGGTCCTCAGGATTCAACTTAACTTGGTTGGAGCCTTATGTTCAATCTGCACTGGGAATGAAGTCTCATTTGGAAAGAGCAGCGGGTATGGATGATTTAAGGGACAATGTGGTTGCCATTGAGATCAAGATGAAGAATCTGAGGGGAGAACTTGCTGCTGCAGAAGCTGAGTTTGTGGAAGCAAGGAAAGCTTTGGCTGAGGCAAGAAAAGGTTACAAAGAGATAGATATGAATGATGTGTTAGGCTATTCCATGTTTTAG 1080 0.4167 MSISFETFTWKIQNFSKQNTKNLQSKAFRIGHHKWRIRLYPLRRDVNHFSLYLMVADSLPAYGWSRTTYFKLVVTNQVDANKSIVKETQQKFNGGNRSWGSTFLTLSDFYDPNQGYLVNNTCIIEAHVCVSDVPPHAIKLRKTSSSISPASDSISILLDDQETESTDGSETLTSATCRSSRTEDEDECSDLTLKDIINLDSLGKEEASFFPLVEDACMWHPDLIQSQRNRSERFKIWAFTSLGQVLHFLKTSKVKDMDEDGCNYLKGLWEELVRSSGFNLTWLEPYVQSALGMKSHLERAAGMDDLRDNVVAIEIKMKNLRGELAAAEAEFVEARKALAEARKGYKEIDMNDVLGYSMF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03604 359 Pfam MATH domain 12 129 IPR002083 GO:0005515
Aip06g03604 359 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 4 147 IPR008974 GO:0005515
Aip06g03604 359 SUPERFAMILY TRAF domain-like 7 132 - -
Aip06g03604 359 Coils Coil 303 344 - -
Aip06g03604 359 MobiDBLite consensus disorder prediction 160 181 - -
Aip06g03604 359 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 5 339 - -
Aip06g03604 359 SMART math_3 7 109 IPR002083 GO:0005515
Aip06g03604 359 ProSiteProfiles MATH/TRAF domain profile. 5 128 IPR002083 GO:0005515
Aip06g03604 359 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 5 339 - -
Aip06g03604 359 CDD MATH 7 128 IPR002083 GO:0005515
Aip06g03604 359 MobiDBLite consensus disorder prediction 160 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03604 Aip-Chr6 133440266 133442731 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03604 - - adu:107492716 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g03079 02 107372009 107373808 Aip06g03604 06 133440266 133442731 PCT